Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SCN1BQ07699 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN1BQ07699 AC092447.7-201ENST00000422212 1621 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCN1BQ07699 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SCN1BQ07699 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCN1BQ07699 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SCN1BQ07699 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCN1BQ07699 SNORA4.3-201ENST00000365564 137 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 RPS3AP36-201ENST00000398190 775 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 RNU2-8P-201ENST00000410727 190 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 RNA5SP229-201ENST00000410809 99 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 OR51A5P-201ENST00000415429 942 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN1BQ07699 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN1BQ07699 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AL591704.1-201ENST00000432574 275 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 RPL21P2-201ENST00000440049 481 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 PGBD4P3-201ENST00000440731 581 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 BRK1P2-201ENST00000442875 223 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN1BQ07699 AC092001.1-201ENST00000453012 261 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 RPS27AP9-201ENST00000477681 438 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 GZMAP1-201ENST00000503054 631 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN1BQ07699 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN1BQ07699 AC022447.1-201ENST00000515358 464 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN1BQ07699 RNU2-46P-201ENST00000517038 113 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 SNORA31.19-201ENST00000517079 126 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 RNU6-1220P-201ENST00000517126 108 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC026403.1-201ENST00000518938 295 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC022616.3-201ENST00000523940 148 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN1BQ07699 AC011611.1-201ENST00000552179 197 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN1BQ07699 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN1BQ07699 MIR4782-201ENST00000577987 79 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC005771.1-201ENST00000585581 349 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN1BQ07699 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN1BQ07699 AC015871.2-201ENST00000603605 948 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AL627309.6-201ENST00000606857 840 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC135507.1-201ENST00000607214 561 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC039056.2-201ENST00000622261 511 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 AC012442.3-202ENST00000636742 206 ntBASIC2.77□□□□□ -1.97
SCN1BQ07699 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCN1BQ07699 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 Y_RNA.126-201ENST00000363382 111 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNY4P34-201ENST00000364779 95 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNU6-641P-201ENST00000384006 107 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNU6-1083P-201ENST00000384022 107 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RN7SKP111-201ENST00000410349 271 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNU6-1025P-201ENST00000410629 104 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNU2-25P-201ENST00000411041 191 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RPS3AP3-201ENST00000411933 242 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 HMGN1P14-201ENST00000412459 517 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC080125.1-201ENST00000414888 684 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RPL7P10-201ENST00000417407 739 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN1BQ07699 AL109913.1-201ENST00000421173 514 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC007560.1-201ENST00000426912 237 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC097713.2-201ENST00000430199 356 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN1BQ07699 AC104850.1-201ENST00000435940 476 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AL445687.1-201ENST00000439946 251 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 NANOGNBP1-201ENST00000448444 480 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN1BQ07699 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN1BQ07699 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN1BQ07699 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC098862.1-201ENST00000504991 413 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC118465.1-201ENST00000513820 1271 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 RNU6-581P-201ENST00000516214 105 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 SNORD19.2-201ENST00000516978 73 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SCN1BQ07699 BTF3P12-201ENST00000519620 469 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
SCN1BQ07699 RPL21P12-201ENST00000559810 515 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 CYCSP39-201ENST00000565821 309 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC174048.1-201ENST00000603389 144 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AC091152.3-201ENST00000604227 325 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 AC108479.2-201ENST00000617314 601 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 AL603839.4-201ENST00000624658 1005 ntBASIC2.76□□□□□ -1.97
SCN1BQ07699 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN1BQ07699 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN1BQ07699 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN1BQ07699 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SCN1BQ07699 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN1BQ07699 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN1BQ07699 U8.3-201ENST00000363321 132 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 Z98749.2-208ENST00000381646 500 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 SNORA20.2-201ENST00000383922 131 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms