Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC022432.1-201ENST00000595739 310 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC007687.1-201ENST00000602704 304 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC078795.3-201ENST00000602913 472 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.3□□□□□ -1.88
LTBQ06643 AL133255.1-201ENST00000606374 441 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC093913.1-201ENST00000614178 329 ntBASIC3.3□□□□□ -1.88
LTBQ06643 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.3□□□□□ -1.88
LTBQ06643 AC007656.2-201ENST00000624902 4547 ntBASIC3.3□□□□□ -1.88
LTBQ06643 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LTBQ06643 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC244517.1-201ENST00000606030 2086 ntBASIC3.29□□□□□ -1.88
LTBQ06643 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 AL139276.1-201ENST00000311910 1001 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RNU6-263P-201ENST00000363811 107 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RNU6-188P-201ENST00000364207 107 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RNU5E-6P-201ENST00000365574 115 ntBASIC3.29□□□□□ -1.88
LTBQ06643 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 RNU6-1029P-201ENST00000384109 107 ntBASIC3.29□□□□□ -1.88
LTBQ06643 TXNP7-201ENST00000406296 293 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RNU6-516P-201ENST00000411381 104 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AC005517.2-201ENST00000424673 553 ntBASIC3.29□□□□□ -1.88
LTBQ06643 RPL7L1P10-201ENST00000427790 463 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AC005534.2-201ENST00000431047 433 ntBASIC3.29□□□□□ -1.88
LTBQ06643 HMGB1P18-201ENST00000438801 619 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AC005094.1-201ENST00000440420 368 ntBASIC3.29□□□□□ -1.88
LTBQ06643 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.29□□□□□ -1.88
LTBQ06643 MTND1P18-201ENST00000448191 573 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AL162395.1-201ENST00000457882 422 ntBASIC3.29□□□□□ -1.88
LTBQ06643 snoU109.4-201ENST00000458953 143 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBQ06643 AC023141.12-201ENST00000512399 199 ntBASIC3.29□□□□□ -1.88
LTBQ06643 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.29□□□□□ -1.88
LTBQ06643 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.29□□□□□ -1.88
LTBQ06643 RNA5SP309-201ENST00000516670 106 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBQ06643 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.29□□□□□ -1.88
LTBQ06643 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBQ06643 AC026464.5-201ENST00000562497 722 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.29□□□□□ -1.88
LTBQ06643 AC024619.4-201ENST00000580924 316 ntBASIC3.29□□□□□ -1.88
LTBQ06643 MIR4424-201ENST00000585257 86 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBQ06643 AL133216.2-202ENST00000634512 349 ntBASIC3.29□□□□□ -1.88
LTBQ06643 AL732372.2-225ENST00000642124 456 ntBASIC3.29□□□□□ -1.88
LTBQ06643 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LTBQ06643 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LTBQ06643 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.29□□□□□ -1.88
LTBQ06643 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LTBQ06643 AL645937.1-201ENST00000641739 1652 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC007685.1-201ENST00000329806 452 ntBASIC3.28□□□□□ -1.88
LTBQ06643 RNU6-522P-201ENST00000364497 107 ntBASIC3.28□□□□□ -1.88
LTBQ06643 RNU4-66P-201ENST00000365199 138 ntBASIC3.28□□□□□ -1.88
LTBQ06643 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBQ06643 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBQ06643 AL136372.1-201ENST00000403060 228 ntBASIC3.28□□□□□ -1.88
LTBQ06643 RNA5SP56-201ENST00000410277 118 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC093106.2-201ENST00000428212 385 ntBASIC3.28□□□□□ -1.88
LTBQ06643 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.28□□□□□ -1.88
LTBQ06643 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.28□□□□□ -1.88
LTBQ06643 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LTBQ06643 AC010655.1-201ENST00000449336 292 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.28□□□□□ -1.88
LTBQ06643 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.28□□□□□ -1.88
LTBQ06643 AC084357.1-201ENST00000473404 255 ntBASIC3.28□□□□□ -1.88
LTBQ06643 ST13P14-201ENST00000474095 734 ntBASIC3.28□□□□□ -1.88
LTBQ06643 RPS15AP36-201ENST00000492022 382 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.28□□□□□ -1.88
LTBQ06643 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBQ06643 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.28□□□□□ -1.88
LTBQ06643 SNORA19.2-201ENST00000516013 114 ntBASIC3.28□□□□□ -1.88
LTBQ06643 Y_RNA.665-201ENST00000516177 98 ntBASIC3.28□□□□□ -1.88
LTBQ06643 Y_RNA.691-201ENST00000516611 103 ntBASIC3.28□□□□□ -1.88
LTBQ06643 RN7SKP256-201ENST00000517201 314 ntBASIC3.28□□□□□ -1.88
LTBQ06643 DEFB108D-201ENST00000527787 222 ntBASIC3.28□□□□□ -1.88
LTBQ06643 CR383656.7-201ENST00000548164 174 ntBASIC3.28□□□□□ -1.88
LTBQ06643 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBQ06643 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBQ06643 MIR4703-201ENST00000577728 79 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC006270.2-201ENST00000578523 652 ntBASIC3.28□□□□□ -1.88
LTBQ06643 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.28□□□□□ -1.88
LTBQ06643 AL137843.1-201ENST00000605078 385 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.28□□□□□ -1.88
LTBQ06643 uc_338.32-201ENST00000615087 172 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AC011155.2-201ENST00000623202 216 ntBASIC3.28□□□□□ -1.88
LTBQ06643 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.28□□□□□ -1.88
LTBQ06643 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
LTBQ06643 TAB3P1-202ENST00000452645 1634 ntBASIC3.28□□□□□ -1.88
LTBQ06643 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LTBQ06643 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBQ06643 AC010733.2-201ENST00000589496 5702 ntBASIC3.28□□□□□ -1.88
LTBQ06643 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LTBQ06643 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms