Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC022387.2-201ENST00000604050 448 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AL355472.4-201ENST00000610233 626 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.48□□□□□ -2.33
HSPG2P98160 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HSPG2P98160 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.48□□□□□ -2.33
HSPG2P98160 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.48□□□□□ -2.33
HSPG2P98160 AC112198.4-201ENST00000515450 351 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 RN7SKP179-201ENST00000516126 217 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HSPG2P98160 MTND2P13-201ENST00000577438 1039 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.48□□□□□ -2.33
HSPG2P98160 AL096840.1-201ENST00000603287 93 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC103810.9-201ENST00000606688 112 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AL050343.2-201ENST00000607338 280 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AP001350.1-201ENST00000601906 1524 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HSPG2P98160 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HSPG2P98160 AC110792.3-201ENST00000595906 1614 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
HSPG2P98160 RNU6-43P-201ENST00000384302 107 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC079780.1-201ENST00000428259 207 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.48□□□□□ -2.33
HSPG2P98160 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.48□□□□□ -2.33
HSPG2P98160 HSBP1P1-201ENST00000555205 166 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 MTCYBP23-201ENST00000558717 1102 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC133485.1-201ENST00000567176 124 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC138907.6-201ENST00000568401 126 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AP000254.1-201ENST00000609934 520 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.48□□□□□ -2.33
HSPG2P98160 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC109809.1-201ENST00000619665 545 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC022022.1-201ENST00000430304 178 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.47□□□□□ -2.33
HSPG2P98160 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.47□□□□□ -2.33
HSPG2P98160 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.47□□□□□ -2.33
HSPG2P98160 RPS27P23-201ENST00000487608 251 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 OR10V3P-201ENST00000525712 725 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.47□□□□□ -2.33
HSPG2P98160 LINC00933-203ENST00000559812 219 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HSPG2P98160 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.47□□□□□ -2.33
HSPG2P98160 AC009090.3-201ENST00000616553 565 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
HSPG2P98160 U8.3-201ENST00000363321 132 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 RNU6-1164P-201ENST00000364428 107 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 RNU6-335P-201ENST00000364563 113 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AL356432.1-201ENST00000405809 419 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HSPG2P98160 SYF2P1-201ENST00000550658 413 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC087045.1-201ENST00000605856 382 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC007792.1-201ENST00000623023 402 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC007785.2-201ENST00000598627 1916 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
HSPG2P98160 AC241520.1-201ENST00000422654 1099 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
HSPG2P98160 MIR4802-201ENST00000581881 80 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC012443.1-201ENST00000605605 231 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 AC068787.1-201ENST00000623908 691 ntBASIC0.47□□□□□ -2.33
HSPG2P98160 MTND5P11-201ENST00000511037 1812 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 MTND4LP13-201ENST00000425022 298 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.46□□□□□ -2.34
HSPG2P98160 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.46□□□□□ -2.34
HSPG2P98160 AC087884.1-201ENST00000469738 328 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 EIF4EP5-201ENST00000528228 640 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC146944.4-201ENST00000602697 718 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AP000654.2-201ENST00000605633 586 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 CBX3P1-201ENST00000325243 554 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 MIR26B-201ENST00000362251 77 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 RNU6-173P-201ENST00000364215 104 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AL356379.1-201ENST00000414105 126 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.46□□□□□ -2.34
HSPG2P98160 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.46□□□□□ -2.34
HSPG2P98160 AC023050.1-201ENST00000498198 304 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.46□□□□□ -2.34
HSPG2P98160 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.46□□□□□ -2.34
HSPG2P98160 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HSPG2P98160 AC098591.2-201ENST00000510152 315 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 HMGB1P46-201ENST00000520062 610 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 BNIP3P26-201ENST00000600827 554 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AL355297.2-201ENST00000604792 129 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
HSPG2P98160 AC091812.1-201ENST00000432235 1948 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
HSPG2P98160 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
HSPG2P98160 AL158823.1-201ENST00000418441 478 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC244453.4-201ENST00000419150 388 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC246680.2-201ENST00000422106 389 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.46□□□□□ -2.34
HSPG2P98160 AC097493.1-201ENST00000463958 372 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.46□□□□□ -2.34
HSPG2P98160 SNORA44.1-201ENST00000517031 108 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
HSPG2P98160 RNU6-939P-201ENST00000384634 107 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 MIR92A2-201ENST00000385299 75 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HSPG2P98160 MTCO3P46-201ENST00000425787 232 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AC093716.1-201ENST00000435923 377 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms