Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CL1P78423 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.82□□□□□ -1.96
CX3CL1P78423 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.82□□□□□ -1.96
CX3CL1P78423 MIR30E-201ENST00000362104 92 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 RNA5SP124-201ENST00000362739 110 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 RNU6-1322P-201ENST00000364309 107 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 SNORA4.3-201ENST00000365564 137 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 SNORA5A-201ENST00000384111 134 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 Y_RNA.554-201ENST00000384672 102 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 RNU6-550P-201ENST00000391057 101 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.82□□□□□ -1.96
CX3CL1P78423 RNU2-68P-201ENST00000410878 191 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC017079.2-201ENST00000416102 485 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 MRPL50P2-201ENST00000416821 482 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 MTCYBP5-201ENST00000423752 1135 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AL160275.3-201ENST00000423876 471 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC018644.1-201ENST00000429934 551 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 DPPA3P1-201ENST00000448050 469 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 Z99127.3-201ENST00000448158 395 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AL133547.1-201ENST00000448546 220 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.82□□□□□ -1.96
CX3CL1P78423 AL118520.1-201ENST00000450770 291 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 CACYBPP2-201ENST00000453625 678 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 RPS4XP2-201ENST00000458402 793 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 snoU13.28-201ENST00000459235 104 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.82□□□□□ -1.96
CX3CL1P78423 RN7SL542P-201ENST00000467147 294 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC034236.1-201ENST00000469891 373 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AP002884.2-201ENST00000471647 395 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.82□□□□□ -1.96
CX3CL1P78423 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.82□□□□□ -1.96
CX3CL1P78423 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.82□□□□□ -1.96
CX3CL1P78423 RNU6-143P-201ENST00000516942 93 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 RNU6-1315P-201ENST00000517187 99 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.82□□□□□ -1.96
CX3CL1P78423 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.82□□□□□ -1.96
CX3CL1P78423 AP005435.4-201ENST00000529514 284 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AL163153.1-201ENST00000554223 283 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.82□□□□□ -1.96
CX3CL1P78423 ZNF519P2-201ENST00000557032 169 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.82□□□□□ -1.96
CX3CL1P78423 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.82□□□□□ -1.96
CX3CL1P78423 MIR4703-201ENST00000577728 79 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AL109618.2-201ENST00000605527 211 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC126118.1-201ENST00000607744 628 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 U4.5-201ENST00000617137 123 ntBASIC2.82□□□□□ -1.96
CX3CL1P78423 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.82□□□□□ -1.96
CX3CL1P78423 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CX3CL1P78423 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.82□□□□□ -1.96
CX3CL1P78423 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.82□□□□□ -1.96
CX3CL1P78423 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
CX3CL1P78423 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CX3CL1P78423 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CX3CL1P78423 GABRG2-229ENST00000641017 3628 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CX3CL1P78423 RNU6-1287P-201ENST00000362914 107 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 RNU6-1060P-201ENST00000384664 107 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AL590002.1-201ENST00000406554 418 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 RNA5SP31-201ENST00000411144 127 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 OR6C66P-201ENST00000414917 930 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 RPL7P46-201ENST00000425129 740 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.81□□□□□ -1.96
CX3CL1P78423 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AC016691.1-201ENST00000441321 413 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AC104058.1-201ENST00000448028 297 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 MTND1P18-201ENST00000448191 573 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC125238.1-201ENST00000448842 249 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 GMFBP1-201ENST00000467831 427 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 RN7SL594P-201ENST00000470590 287 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC083798.1-201ENST00000472671 131 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC126182.1-201ENST00000478134 357 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AC104619.4-201ENST00000510773 249 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 RN7SKP219-201ENST00000516825 296 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 Y_RNA.704-201ENST00000516851 102 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 TRMT10BP1-201ENST00000519377 943 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AL512360.1-201ENST00000555346 234 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.81□□□□□ -1.96
CX3CL1P78423 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.81□□□□□ -1.96
CX3CL1P78423 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.81□□□□□ -1.96
CX3CL1P78423 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.81□□□□□ -1.96
CX3CL1P78423 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.81□□□□□ -1.96
CX3CL1P78423 AL670379.4-201ENST00000605279 254 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC093788.1-201ENST00000609356 927 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 MIR7851-201ENST00000610611 160 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC099506.2-201ENST00000623074 221 ntBASIC2.81□□□□□ -1.96
CX3CL1P78423 AC006020.1-201ENST00000420179 1854 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms