Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 CKS1BP2-201ENST00000497342 240 ntBASIC1.6□□□□□ -2.15
LSM6P62312 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
LSM6P62312 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.6□□□□□ -2.15
LSM6P62312 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM6P62312 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.6□□□□□ -2.15
LSM6P62312 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.6□□□□□ -2.15
LSM6P62312 AC068790.3-201ENST00000602988 553 ntBASIC1.6□□□□□ -2.15
LSM6P62312 KATNBL1P5-201ENST00000605015 517 ntBASIC1.6□□□□□ -2.15
LSM6P62312 AC002550.2-201ENST00000621246 394 ntBASIC1.6□□□□□ -2.15
LSM6P62312 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.6□□□□□ -2.15
LSM6P62312 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LSM6P62312 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
LSM6P62312 RNU4-26P-201ENST00000410270 107 ntBASIC1.59□□□□□ -2.15
LSM6P62312 RNU6-1140P-201ENST00000410517 106 ntBASIC1.59□□□□□ -2.15
LSM6P62312 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM6P62312 RPL26P27-201ENST00000414397 437 ntBASIC1.59□□□□□ -2.15
LSM6P62312 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM6P62312 AC244636.1-201ENST00000421152 228 ntBASIC1.59□□□□□ -2.15
LSM6P62312 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM6P62312 SNRPEP9-201ENST00000436794 238 ntBASIC1.59□□□□□ -2.15
LSM6P62312 TPT1P14-201ENST00000448018 505 ntBASIC1.59□□□□□ -2.15
LSM6P62312 AC087884.1-201ENST00000469738 328 ntBASIC1.59□□□□□ -2.15
LSM6P62312 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM6P62312 AC092436.1-201ENST00000506450 503 ntBASIC1.59□□□□□ -2.15
LSM6P62312 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.59□□□□□ -2.15
LSM6P62312 SNORA76.2-201ENST00000517095 137 ntBASIC1.59□□□□□ -2.15
LSM6P62312 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM6P62312 AL138478.1-201ENST00000612252 832 ntBASIC1.59□□□□□ -2.15
LSM6P62312 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LSM6P62312 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
LSM6P62312 AL356473.1-201ENST00000406203 1408 ntBASIC1.58□□□□□ -2.16
LSM6P62312 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM6P62312 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LSM6P62312 SNORD114-1-201ENST00000362705 72 ntBASIC1.58□□□□□ -2.16
LSM6P62312 RNU6-932P-201ENST00000391108 106 ntBASIC1.58□□□□□ -2.16
LSM6P62312 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
LSM6P62312 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM6P62312 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM6P62312 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM6P62312 MOB1AP2-201ENST00000446060 614 ntBASIC1.58□□□□□ -2.16
LSM6P62312 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM6P62312 RPS15AP17-201ENST00000470598 390 ntBASIC1.58□□□□□ -2.16
LSM6P62312 AC117503.1-201ENST00000472241 394 ntBASIC1.58□□□□□ -2.16
LSM6P62312 RNU1-41P-201ENST00000516161 162 ntBASIC1.58□□□□□ -2.16
LSM6P62312 RNU1-48P-201ENST00000516400 162 ntBASIC1.58□□□□□ -2.16
LSM6P62312 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
LSM6P62312 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
LSM6P62312 RANP3-201ENST00000530970 276 ntBASIC1.58□□□□□ -2.16
LSM6P62312 DUXAP1-201ENST00000556632 463 ntBASIC1.58□□□□□ -2.16
LSM6P62312 AC110588.1-201ENST00000559699 137 ntBASIC1.58□□□□□ -2.16
LSM6P62312 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
LSM6P62312 MIR3618-201ENST00000580330 88 ntBASIC1.58□□□□□ -2.16
LSM6P62312 AL031274.2-201ENST00000599419 203 ntBASIC1.58□□□□□ -2.16
LSM6P62312 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM6P62312 KATNBL1P1-201ENST00000605192 748 ntBASIC1.58□□□□□ -2.16
LSM6P62312 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.58□□□□□ -2.16
LSM6P62312 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM6P62312 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.58□□□□□ -2.16
LSM6P62312 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.58□□□□□ -2.16
LSM6P62312 AL390862.1-201ENST00000635467 1469 ntBASIC1.57□□□□□ -2.16
LSM6P62312 RNU6-353P-201ENST00000364266 108 ntBASIC1.57□□□□□ -2.16
LSM6P62312 U3.13-201ENST00000364804 214 ntBASIC1.57□□□□□ -2.16
LSM6P62312 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LSM6P62312 MIR23A-201ENST00000385245 73 ntBASIC1.57□□□□□ -2.16
LSM6P62312 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LSM6P62312 MIR1294-201ENST00000408503 142 ntBASIC1.57□□□□□ -2.16
LSM6P62312 RNA5SP450-201ENST00000411206 102 ntBASIC1.57□□□□□ -2.16
LSM6P62312 RNU6-575P-201ENST00000411326 105 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM6P62312 MTCO2P5-201ENST00000422621 426 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM6P62312 MTND6P13-201ENST00000443510 523 ntBASIC1.57□□□□□ -2.16
LSM6P62312 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM6P62312 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.57□□□□□ -2.16
LSM6P62312 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM6P62312 AC107953.1-201ENST00000522216 297 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.57□□□□□ -2.16
LSM6P62312 AC022861.1-201ENST00000522981 663 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM6P62312 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.57□□□□□ -2.16
LSM6P62312 YWHAZP1-201ENST00000556286 722 ntBASIC1.57□□□□□ -2.16
LSM6P62312 DEFB122-202ENST00000569013 197 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM6P62312 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM6P62312 MTCYBP22-201ENST00000603788 447 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AC103710.2-201ENST00000609912 942 ntBASIC1.57□□□□□ -2.16
LSM6P62312 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.57□□□□□ -2.16
LSM6P62312 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.57□□□□□ -2.16
LSM6P62312 AC109454.4-201ENST00000623411 649 ntBASIC1.57□□□□□ -2.16
LSM6P62312 OR1S1-201ENST00000624470 978 ntBASIC1.57□□□□□ -2.16
LSM6P62312 LINC02211-204ENST00000642024 1070 ntBASIC1.57□□□□□ -2.16
LSM6P62312 RNU1-72P-201ENST00000362976 153 ntBASIC1.56□□□□□ -2.16
LSM6P62312 RNA5SP126-201ENST00000365092 109 ntBASIC1.56□□□□□ -2.16
LSM6P62312 RPS20P15-201ENST00000412792 311 ntBASIC1.56□□□□□ -2.16
LSM6P62312 AL451054.2-201ENST00000420896 202 ntBASIC1.56□□□□□ -2.16
LSM6P62312 PGBD4P6-201ENST00000421501 610 ntBASIC1.56□□□□□ -2.16
LSM6P62312 NANOGP2-201ENST00000435391 727 ntBASIC1.56□□□□□ -2.16
LSM6P62312 RPL7P54-201ENST00000438336 674 ntBASIC1.56□□□□□ -2.16
LSM6P62312 RPL32P28-201ENST00000443577 397 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms