Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.14□□□□□ -2.07
VSX2P58304 RNU6-1328P-201ENST00000410938 106 ntBASIC2.14□□□□□ -2.07
VSX2P58304 MORF4L1P6-201ENST00000418771 268 ntBASIC2.14□□□□□ -2.07
VSX2P58304 BTF3L4P3-201ENST00000418879 476 ntBASIC2.14□□□□□ -2.07
VSX2P58304 ZNF863P-201ENST00000426746 417 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VSX2P58304 USP9YP24-201ENST00000434374 697 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.14□□□□□ -2.07
VSX2P58304 FAM103A2P-201ENST00000444122 354 ntBASIC2.14□□□□□ -2.07
VSX2P58304 USP9YP17-201ENST00000444617 696 ntBASIC2.14□□□□□ -2.07
VSX2P58304 PAXBP1P1-201ENST00000449315 447 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AC092798.1-201ENST00000458542 409 ntBASIC2.14□□□□□ -2.07
VSX2P58304 RPS20P22-201ENST00000473700 357 ntBASIC2.14□□□□□ -2.07
VSX2P58304 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.14□□□□□ -2.07
VSX2P58304 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VSX2P58304 AC091951.3-201ENST00000504093 246 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.14□□□□□ -2.07
VSX2P58304 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.14□□□□□ -2.07
VSX2P58304 SCARNA17.1-201ENST00000516211 143 ntBASIC2.14□□□□□ -2.07
VSX2P58304 RNU6-390P-201ENST00000516259 103 ntBASIC2.14□□□□□ -2.07
VSX2P58304 SCARNA17.2-201ENST00000516334 143 ntBASIC2.14□□□□□ -2.07
VSX2P58304 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.14□□□□□ -2.07
VSX2P58304 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.14□□□□□ -2.07
VSX2P58304 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
VSX2P58304 AL133153.1-201ENST00000557756 303 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.14□□□□□ -2.07
VSX2P58304 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
VSX2P58304 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.14□□□□□ -2.07
VSX2P58304 MTCO2P2-201ENST00000591258 225 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AC002545.1-201ENST00000592511 181 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AC112220.3-201ENST00000605502 502 ntBASIC2.14□□□□□ -2.07
VSX2P58304 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.14□□□□□ -2.07
VSX2P58304 SCARNA17.4-201ENST00000614296 143 ntBASIC2.14□□□□□ -2.07
VSX2P58304 AC079395.3-201ENST00000615161 484 ntBASIC2.14□□□□□ -2.07
VSX2P58304 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.14□□□□□ -2.07
VSX2P58304 CU459211.1-201ENST00000635667 749 ntBASIC2.14□□□□□ -2.07
VSX2P58304 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
VSX2P58304 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.14□□□□□ -2.07
VSX2P58304 RNU6-462P-201ENST00000362659 105 ntBASIC2.13□□□□□ -2.07
VSX2P58304 SNORA68.1-201ENST00000364537 132 ntBASIC2.13□□□□□ -2.07
VSX2P58304 MIR19A-201ENST00000384878 82 ntBASIC2.13□□□□□ -2.07
VSX2P58304 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL591416.1-201ENST00000404015 867 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL513475.1-201ENST00000406602 315 ntBASIC2.13□□□□□ -2.07
VSX2P58304 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 RNU2-49P-201ENST00000410666 184 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL359704.1-201ENST00000411586 781 ntBASIC2.13□□□□□ -2.07
VSX2P58304 MTCO2P8-201ENST00000412213 658 ntBASIC2.13□□□□□ -2.07
VSX2P58304 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VSX2P58304 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.13□□□□□ -2.07
VSX2P58304 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL139415.2-201ENST00000431968 163 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 MTCO3P45-201ENST00000443036 613 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AC010095.1-201ENST00000443543 144 ntBASIC2.13□□□□□ -2.07
VSX2P58304 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 CECR9-201ENST00000453421 199 ntBASIC2.13□□□□□ -2.07
VSX2P58304 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 EIF4EP3-201ENST00000498782 656 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AC114786.4-201ENST00000508771 728 ntBASIC2.13□□□□□ -2.07
VSX2P58304 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
VSX2P58304 AC114797.1-201ENST00000514003 728 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
VSX2P58304 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.13□□□□□ -2.07
VSX2P58304 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.13□□□□□ -2.07
VSX2P58304 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.13□□□□□ -2.07
VSX2P58304 RPS15AP11-201ENST00000594193 385 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL139022.2-201ENST00000606934 443 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL078595.3-201ENST00000623815 1166 ntBASIC2.13□□□□□ -2.07
VSX2P58304 AL160394.1-201ENST00000624765 724 ntBASIC2.13□□□□□ -2.07
VSX2P58304 PCMTD1P7-201ENST00000634506 357 ntBASIC2.13□□□□□ -2.07
VSX2P58304 MIR4275-201ENST00000636486 87 ntBASIC2.13□□□□□ -2.07
VSX2P58304 MIR7515-201ENST00000637837 67 ntBASIC2.13□□□□□ -2.07
VSX2P58304 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VSX2P58304 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VSX2P58304 RNU6-461P-201ENST00000364195 107 ntBASIC2.12□□□□□ -2.07
VSX2P58304 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VSX2P58304 RNU6-83P-201ENST00000384568 112 ntBASIC2.12□□□□□ -2.07
VSX2P58304 RN7SKP223-201ENST00000410582 62 ntBASIC2.12□□□□□ -2.07
VSX2P58304 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 SKA2P1-201ENST00000425592 390 ntBASIC2.12□□□□□ -2.07
VSX2P58304 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.12□□□□□ -2.07
VSX2P58304 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VSX2P58304 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
VSX2P58304 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 AC008481.1-201ENST00000463278 396 ntBASIC2.12□□□□□ -2.07
VSX2P58304 RPS29P21-201ENST00000496272 170 ntBASIC2.12□□□□□ -2.07
VSX2P58304 GTF2IP9-201ENST00000502460 301 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.12□□□□□ -2.07
VSX2P58304 AC119751.4-201ENST00000507498 357 ntBASIC2.12□□□□□ -2.07
VSX2P58304 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.12□□□□□ -2.07
VSX2P58304 MTATP6P9-201ENST00000515039 680 ntBASIC2.12□□□□□ -2.07
VSX2P58304 MTCO2P15-201ENST00000532655 656 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms