Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DUXAP4-201ENST00000603046 613 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 AL162373.1-201ENST00000620433 407 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.48□□□□□ -2.33
BRCA2P51587 SNORA16B-201ENST00000364674 135 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.48□□□□□ -2.33
BRCA2P51587 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.48□□□□□ -2.33
BRCA2P51587 MTCO1P53-201ENST00000441633 699 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.48□□□□□ -2.33
BRCA2P51587 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.48□□□□□ -2.33
BRCA2P51587 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.48□□□□□ -2.33
BRCA2P51587 AC073111.2-201ENST00000605657 1075 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 AC008945.2-201ENST00000606056 604 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 CISD1P1-201ENST00000393907 327 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.47□□□□□ -2.33
BRCA2P51587 RPL30P5-201ENST00000494923 336 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
BRCA2P51587 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.47□□□□□ -2.33
BRCA2P51587 SNORA3.4-201ENST00000515969 96 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.47□□□□□ -2.33
BRCA2P51587 AC073569.3-201ENST00000619055 682 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 AC009452.1-201ENST00000640823 606 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 SNORD56-201ENST00000413522 71 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
BRCA2P51587 Y_RNA.654-201ENST00000497848 106 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 RNU6-970P-201ENST00000516312 107 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.47□□□□□ -2.33
BRCA2P51587 RNU4-73P-201ENST00000363164 141 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 Y_RNA.453-201ENST00000384223 109 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.47□□□□□ -2.33
BRCA2P51587 AC245128.3-201ENST00000594721 748 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.47□□□□□ -2.33
BRCA2P51587 RNU6-1181P-201ENST00000384191 106 ntBASIC0.46□□□□□ -2.34
BRCA2P51587 MIR146A-201ENST00000385201 99 ntBASIC0.46□□□□□ -2.34
BRCA2P51587 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
BRCA2P51587 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
BRCA2P51587 SUB1P1-201ENST00000524415 382 ntBASIC0.46□□□□□ -2.34
BRCA2P51587 SNORA46.1-201ENST00000391069 153 ntBASIC0.46□□□□□ -2.34
BRCA2P51587 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.46□□□□□ -2.34
BRCA2P51587 DUSP12P1-201ENST00000612874 516 ntBASIC0.46□□□□□ -2.34
BRCA2P51587 uc_338.9-201ENST00000617424 182 ntBASIC0.46□□□□□ -2.34
BRCA2P51587 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.46□□□□□ -2.34
BRCA2P51587 RNU1-58P-201ENST00000362413 163 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 RNU4-42P-201ENST00000364738 142 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 MIR17-201ENST00000385012 84 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 AL356776.1-201ENST00000406574 447 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 AC010285.1-201ENST00000470580 392 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.45□□□□□ -2.34
BRCA2P51587 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.45□□□□□ -2.34
BRCA2P51587 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
BRCA2P51587 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.45□□□□□ -2.34
BRCA2P51587 AC096632.1-201ENST00000427395 310 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.45□□□□□ -2.34
BRCA2P51587 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.45□□□□□ -2.34
BRCA2P51587 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
BRCA2P51587 Y_RNA.552-201ENST00000384665 112 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 MIR515-2-201ENST00000384883 83 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 MIR515-1-201ENST00000384884 83 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 AC092832.1-201ENST00000422934 400 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 RPL39P28-201ENST00000465655 155 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 SNORA14.1-201ENST00000516113 141 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.45□□□□□ -2.34
BRCA2P51587 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.45□□□□□ -2.34
BRCA2P51587 AL138976.2-201ENST00000563989 694 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 AC103710.4-201ENST00000609301 899 ntBASIC0.45□□□□□ -2.34
BRCA2P51587 RPL23AP95-201ENST00000426806 265 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 RSL24D1P8-201ENST00000434442 492 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 MTND5P14-201ENST00000441481 1267 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 MTND5P8-201ENST00000449817 1083 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.44□□□□□ -2.34
BRCA2P51587 MIR5190-201ENST00000581537 80 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 AC106052.1-201ENST00000608029 497 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 AC100821.1-201ENST00000523153 2479 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 MRPL35P3-201ENST00000421557 364 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 AC105252.1-201ENST00000503089 286 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 CBX3P3-201ENST00000508108 532 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 RRN3P3-201ENST00000549207 578 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 AC109809.1-201ENST00000619665 545 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
BRCA2P51587 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
BRCA2P51587 RPS29P8-201ENST00000445109 171 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 RNU1-98P-201ENST00000458992 160 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 HMGB3P3-201ENST00000510526 400 ntBASIC0.44□□□□□ -2.34
BRCA2P51587 RNY4P24-201ENST00000362735 96 ntBASIC0.43□□□□□ -2.34
BRCA2P51587 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.43□□□□□ -2.34
BRCA2P51587 AC007834.2-201ENST00000536310 343 ntBASIC0.43□□□□□ -2.34
BRCA2P51587 RLIMP2-201ENST00000427891 1563 ntBASIC0.43□□□□□ -2.34
BRCA2P51587 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
BRCA2P51587 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
BRCA2P51587 MIR101-1-201ENST00000362265 75 ntBASIC0.43□□□□□ -2.34
BRCA2P51587 MIR1207-201ENST00000408249 87 ntBASIC0.43□□□□□ -2.34
BRCA2P51587 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.43□□□□□ -2.34
BRCA2P51587 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.43□□□□□ -2.34
BRCA2P51587 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.43□□□□□ -2.34
BRCA2P51587 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
BRCA2P51587 AL391516.1-201ENST00000554380 2449 ntBASIC0.43□□□□□ -2.34
BRCA2P51587 AC073464.3-201ENST00000422564 712 ntBASIC0.42□□□□□ -2.34
BRCA2P51587 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms