Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HSPE1P11-201ENST00000339579 310 ntBASIC2.99□□□□□ -1.93
LHX1P48742 SNORD56.2-201ENST00000363242 71 ntBASIC2.99□□□□□ -1.93
LHX1P48742 Y_RNA.111-201ENST00000363248 100 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNY1P12-201ENST00000364251 105 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNU5E-6P-201ENST00000365574 115 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNA5SP252-201ENST00000391131 119 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNU1-101P-201ENST00000391171 127 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNU6-248P-201ENST00000410720 107 ntBASIC2.99□□□□□ -1.93
LHX1P48742 ZNF90P2-204ENST00000419323 1075 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AL365338.1-201ENST00000422282 858 ntBASIC2.99□□□□□ -1.93
LHX1P48742 ISCA1P6-201ENST00000427740 390 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC104850.1-201ENST00000435940 476 ntBASIC2.99□□□□□ -1.93
LHX1P48742 NEFMP1-201ENST00000443423 1006 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 RPL21P41-201ENST00000459863 264 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC087588.1-201ENST00000462203 316 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC006483.1-201ENST00000487308 313 ntBASIC2.99□□□□□ -1.93
LHX1P48742 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LHX1P48742 ARL2BPP4-201ENST00000506854 471 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 MTND4LP22-201ENST00000508209 276 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC105313.1-201ENST00000509121 353 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNU7-51P-201ENST00000516560 62 ntBASIC2.99□□□□□ -1.93
LHX1P48742 SNORA18.6-201ENST00000516792 115 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RNU6-1092P-201ENST00000516955 87 ntBASIC2.99□□□□□ -1.93
LHX1P48742 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 AP000867.2-201ENST00000532468 320 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RPS3AP4-201ENST00000555161 764 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
LHX1P48742 AMZ2P1-203ENST00000565833 850 ntBASIC2.99□□□□□ -1.93
LHX1P48742 RSL24D1P11-201ENST00000591045 491 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AL161729.4-201ENST00000604650 476 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC090578.1-201ENST00000604955 591 ntBASIC2.99□□□□□ -1.93
LHX1P48742 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AC010678.1-201ENST00000614118 713 ntBASIC2.99□□□□□ -1.93
LHX1P48742 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.99□□□□□ -1.93
LHX1P48742 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AL589994.2-201ENST00000621124 579 ntBASIC2.99□□□□□ -1.93
LHX1P48742 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX1P48742 AC022336.2-201ENST00000568966 2538 ntBASIC2.99□□□□□ -1.93
LHX1P48742 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LHX1P48742 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX1P48742 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
LHX1P48742 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LHX1P48742 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX1P48742 SNORA5B-201ENST00000363786 132 ntBASIC2.98□□□□□ -1.93
LHX1P48742 SNORA20.2-201ENST00000383922 131 ntBASIC2.98□□□□□ -1.93
LHX1P48742 RNU6-1035P-201ENST00000384477 107 ntBASIC2.98□□□□□ -1.93
LHX1P48742 RPS3AP36-201ENST00000398190 775 ntBASIC2.98□□□□□ -1.93
LHX1P48742 RNU6-195P-201ENST00000411352 109 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX1P48742 MTCO2P34-201ENST00000421994 607 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.98□□□□□ -1.93
LHX1P48742 AC092047.1-201ENST00000424997 240 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX1P48742 AC009961.2-201ENST00000435771 251 ntBASIC2.98□□□□□ -1.93
LHX1P48742 MTND4P32-201ENST00000437189 1237 ntBASIC2.98□□□□□ -1.93
LHX1P48742 ARPC3P1-201ENST00000437218 533 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC073614.1-201ENST00000438690 650 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AL513043.1-201ENST00000439124 535 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.98□□□□□ -1.93
LHX1P48742 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX1P48742 MTCO1P19-201ENST00000443487 500 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC244505.5-201ENST00000443639 207 ntBASIC2.98□□□□□ -1.93
LHX1P48742 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX1P48742 AC010099.1-201ENST00000455434 375 ntBASIC2.98□□□□□ -1.93
LHX1P48742 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX1P48742 MTND4P2-201ENST00000507767 1203 ntBASIC2.98□□□□□ -1.93
LHX1P48742 Vault.3-201ENST00000516676 95 ntBASIC2.98□□□□□ -1.93
LHX1P48742 RNA5SP290-201ENST00000517133 127 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AP006587.4-201ENST00000526053 529 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX1P48742 AC006362.1-201ENST00000567392 174 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC005951.1-201ENST00000576706 485 ntBASIC2.98□□□□□ -1.93
LHX1P48742 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX1P48742 NRBF2P1-201ENST00000587407 859 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AL358072.1-201ENST00000604156 575 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC007619.2-201ENST00000605743 379 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC034102.8-201ENST00000615146 484 ntBASIC2.98□□□□□ -1.93
LHX1P48742 AC073308.1-201ENST00000623696 305 ntBASIC2.98□□□□□ -1.93
LHX1P48742 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.98□□□□□ -1.93
LHX1P48742 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX1P48742 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX1P48742 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LHX1P48742 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
LHX1P48742 FAM35CP-201ENST00000554755 2470 ntBASIC2.97□□□□□ -1.93
LHX1P48742 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX1P48742 MIR26A1-201ENST00000362205 77 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AL354719.1-201ENST00000406535 843 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX1P48742 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX1P48742 ZNF863P-201ENST00000426746 417 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC104651.1-201ENST00000427559 735 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.97□□□□□ -1.93
LHX1P48742 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX1P48742 AC010153.1-201ENST00000432862 727 ntBASIC2.97□□□□□ -1.93
LHX1P48742 AL136380.1-201ENST00000447970 162 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms