Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.33□□□□□ -1.88
SOX2P48431 AC012181.1-201ENST00000479895 423 ntBASIC3.33□□□□□ -1.88
SOX2P48431 RPL7P47-201ENST00000497299 556 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.33□□□□□ -1.88
SOX2P48431 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.33□□□□□ -1.88
SOX2P48431 RNU2-69P-201ENST00000516061 100 ntBASIC3.33□□□□□ -1.88
SOX2P48431 IGKV2-23-201ENST00000518729 323 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.33□□□□□ -1.88
SOX2P48431 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.33□□□□□ -1.88
SOX2P48431 AC004024.1-201ENST00000549244 247 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC090115.3-201ENST00000553218 849 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.33□□□□□ -1.88
SOX2P48431 ZNF192P1-203ENST00000565888 810 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.33□□□□□ -1.88
SOX2P48431 MIR5692A1-201ENST00000580523 69 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL137849.1-201ENST00000604767 169 ntBASIC3.33□□□□□ -1.88
SOX2P48431 ATP1B3P1-201ENST00000605365 821 ntBASIC3.33□□□□□ -1.88
SOX2P48431 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.33□□□□□ -1.88
SOX2P48431 AC006023.2-201ENST00000609916 167 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL121757.2-201ENST00000611223 313 ntBASIC3.33□□□□□ -1.88
SOX2P48431 DUSP12P1-201ENST00000612874 516 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC090132.2-201ENST00000615881 347 ntBASIC3.33□□□□□ -1.88
SOX2P48431 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.33□□□□□ -1.88
SOX2P48431 AC048347.1-201ENST00000624621 427 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL512643.1-201ENST00000635735 524 ntBASIC3.33□□□□□ -1.88
SOX2P48431 MIR1302-1-201ENST00000637932 143 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC116096.1-201ENST00000566804 2314 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC008568.2-201ENST00000623862 2313 ntBASIC3.33□□□□□ -1.88
SOX2P48431 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SOX2P48431 HSPA8P1-201ENST00000425843 1833 ntBASIC3.33□□□□□ -1.88
SOX2P48431 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SOX2P48431 CEP170P1-201ENST00000502249 4587 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
SOX2P48431 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SOX2P48431 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SOX2P48431 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SOX2P48431 RNU6-50P-201ENST00000362356 103 ntBASIC3.32□□□□□ -1.88
SOX2P48431 RNA5SP443-201ENST00000363083 132 ntBASIC3.32□□□□□ -1.88
SOX2P48431 RNA5SP130-201ENST00000364431 114 ntBASIC3.32□□□□□ -1.88
SOX2P48431 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SOX2P48431 RHEBP3-201ENST00000411920 351 ntBASIC3.32□□□□□ -1.88
SOX2P48431 Z85995.1-201ENST00000415547 335 ntBASIC3.32□□□□□ -1.88
SOX2P48431 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.32□□□□□ -1.88
SOX2P48431 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.32□□□□□ -1.88
SOX2P48431 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.32□□□□□ -1.88
SOX2P48431 RN7SL459P-201ENST00000481078 302 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AL160314.1-201ENST00000490836 438 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.32□□□□□ -1.88
SOX2P48431 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.32□□□□□ -1.88
SOX2P48431 RAC1P2-201ENST00000511164 579 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SOX2P48431 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.32□□□□□ -1.88
SOX2P48431 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SOX2P48431 Y_RNA.691-201ENST00000516611 103 ntBASIC3.32□□□□□ -1.88
SOX2P48431 RNA5SP291-201ENST00000517222 105 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.32□□□□□ -1.88
SOX2P48431 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.32□□□□□ -1.88
SOX2P48431 YPEL5P3-201ENST00000547227 352 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.32□□□□□ -1.88
SOX2P48431 MTCO3P23-201ENST00000561363 289 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.32□□□□□ -1.88
SOX2P48431 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SOX2P48431 MIR4330-201ENST00000579077 105 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.32□□□□□ -1.88
SOX2P48431 MIR3941-201ENST00000582572 103 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AL161798.1-201ENST00000604630 131 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC106900.2-201ENST00000604994 317 ntBASIC3.32□□□□□ -1.88
SOX2P48431 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.32□□□□□ -1.88
SOX2P48431 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.32□□□□□ -1.88
SOX2P48431 AC022418.1-201ENST00000624118 445 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.32□□□□□ -1.88
SOX2P48431 Z99571.1-201ENST00000636677 394 ntBASIC3.32□□□□□ -1.88
SOX2P48431 ZNF285B-201ENST00000561698 1767 ntBASIC3.32□□□□□ -1.88
SOX2P48431 AC073073.2-201ENST00000609827 2578 ntBASIC3.32□□□□□ -1.88
SOX2P48431 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SOX2P48431 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.32□□□□□ -1.88
SOX2P48431 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SOX2P48431 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SOX2P48431 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SOX2P48431 RPS4XP5-202ENST00000449995 1334 ntBASIC3.31□□□□□ -1.88
SOX2P48431 RNU6-1252P-201ENST00000363054 104 ntBASIC3.31□□□□□ -1.88
SOX2P48431 RNU4-76P-201ENST00000364509 141 ntBASIC3.31□□□□□ -1.88
SOX2P48431 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SOX2P48431 RNU6-45P-201ENST00000384471 107 ntBASIC3.31□□□□□ -1.88
SOX2P48431 MIR301A-201ENST00000385261 86 ntBASIC3.31□□□□□ -1.88
SOX2P48431 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SOX2P48431 RPS20P15-201ENST00000412792 311 ntBASIC3.31□□□□□ -1.88
SOX2P48431 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
SOX2P48431 RPLP0P7-201ENST00000416050 667 ntBASIC3.31□□□□□ -1.88
SOX2P48431 AC007919.1-201ENST00000429380 217 ntBASIC3.31□□□□□ -1.88
SOX2P48431 SNORA71B-202ENST00000439232 272 ntBASIC3.31□□□□□ -1.88
SOX2P48431 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.31□□□□□ -1.88
SOX2P48431 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.31□□□□□ -1.88
SOX2P48431 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.31□□□□□ -1.88
SOX2P48431 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.31□□□□□ -1.88
SOX2P48431 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
SOX2P48431 AP002812.1-201ENST00000495378 474 ntBASIC3.31□□□□□ -1.88
SOX2P48431 MTCO1P29-201ENST00000496868 288 ntBASIC3.31□□□□□ -1.88
SOX2P48431 TBCAP3-201ENST00000512475 312 ntBASIC3.31□□□□□ -1.88
SOX2P48431 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms