Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LRRC37A5P-203ENST00000580181 585 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.11□□□□□ -2.07
CXCL12P48061 MIR3609-201ENST00000582661 80 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL12P48061 AC023043.2-201ENST00000589678 1026 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 BNIP3P8-201ENST00000597863 560 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 AL050303.3-201ENST00000613704 284 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL12P48061 AL138880.2-201ENST00000616214 239 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL12P48061 AC006927.4-201ENST00000639187 543 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AC092447.10-201ENST00000620607 1652 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
CXCL12P48061 AC093536.2-201ENST00000565257 1406 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 RNU6-462P-201ENST00000362659 105 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U8.8-201ENST00000365399 135 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 RNU2-2P-201ENST00000410396 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AL008987.1-201ENST00000415528 237 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC083875.1-201ENST00000419509 405 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 AC008850.1-201ENST00000427546 362 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AL606517.1-201ENST00000446914 387 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.1□□□□□ -2.07
CXCL12P48061 MTND2P24-201ENST00000453434 806 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL12P48061 AL135752.1-201ENST00000479477 471 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 RPL30P5-201ENST00000494923 336 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC020699.1-201ENST00000505161 445 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 HSPE1P23-201ENST00000509838 286 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 RNU6-928P-201ENST00000516876 104 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CXCL12P48061 AP003467.2-201ENST00000520175 319 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL12P48061 UBE2L4-201ENST00000587688 464 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 GLUD1P4-201ENST00000590914 418 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC060766.3-201ENST00000591442 263 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.1□□□□□ -2.07
CXCL12P48061 U2.15-201ENST00000611544 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.16-201ENST00000613119 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.12-201ENST00000613778 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.20-201ENST00000613956 192 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.9-201ENST00000615427 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.11-201ENST00000616345 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.2-201ENST00000616535 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.3-201ENST00000617785 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.19-201ENST00000618602 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 RNU2-1-201ENST00000618664 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.6-201ENST00000619225 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.5-201ENST00000619465 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 U2.10-201ENST00000620268 191 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AL158801.5-201ENST00000623123 465 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AL356596.1-201ENST00000624230 379 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.1□□□□□ -2.07
CXCL12P48061 CU459211.1-201ENST00000635667 749 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC135776.4-201ENST00000624300 1904 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 AC087359.1-201ENST00000508335 1740 ntBASIC2.1□□□□□ -2.07
CXCL12P48061 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CXCL12P48061 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL12P48061 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL12P48061 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL12P48061 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CXCL12P48061 RNU6-270P-201ENST00000364131 105 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 SNORA23-201ENST00000365128 182 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 RNU6-516P-201ENST00000411381 104 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 MTCO1P17-201ENST00000411522 491 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 TPMTP3-201ENST00000411928 735 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 MTCO2P21-201ENST00000419780 677 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 AC234781.2-201ENST00000426370 994 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AL445669.1-201ENST00000426743 755 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 MTND1P32-201ENST00000433043 938 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 RSU1P2-202ENST00000437884 485 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 FABP5P13-201ENST00000452144 328 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AL109741.2-201ENST00000455561 343 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL12P48061 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL12P48061 FAM92A1P2-202ENST00000504766 877 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 RAC1P5-201ENST00000512182 576 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 SCARNA15.2-201ENST00000516409 127 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AC105185.1-201ENST00000518705 535 ntBASIC2.09□□□□□ -2.07
CXCL12P48061 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL12P48061 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms