Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC025588.2-201ENST00000604851 466 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AC004805.2-201ENST00000605382 482 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AL136981.2-201ENST00000617319 734 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AC012150.2-201ENST00000621300 544 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.45□□□□□ -2.02
SSR1P43307 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SSR1P43307 AL356596.1-201ENST00000624230 379 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AL136313.1-201ENST00000624804 202 ntBASIC2.45□□□□□ -2.02
SSR1P43307 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.45□□□□□ -2.02
SSR1P43307 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSR1P43307 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.45□□□□□ -2.02
SSR1P43307 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSR1P43307 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SSR1P43307 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSR1P43307 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.44□□□□□ -2.02
SSR1P43307 RPS4XP8-201ENST00000402039 771 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.44□□□□□ -2.02
SSR1P43307 AL109913.1-201ENST00000421173 514 ntBASIC2.44□□□□□ -2.02
SSR1P43307 SKA2P1-201ENST00000425592 390 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.44□□□□□ -2.02
SSR1P43307 SNRPEP7-201ENST00000438350 220 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.44□□□□□ -2.02
SSR1P43307 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSR1P43307 EEF1B2P7-201ENST00000451177 676 ntBASIC2.44□□□□□ -2.02
SSR1P43307 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.44□□□□□ -2.02
SSR1P43307 RPS3P1-201ENST00000456781 192 ntBASIC2.44□□□□□ -2.02
SSR1P43307 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
SSR1P43307 RPS20P22-201ENST00000473700 357 ntBASIC2.44□□□□□ -2.02
SSR1P43307 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.44□□□□□ -2.02
SSR1P43307 RNA5SP290-201ENST00000517133 127 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.44□□□□□ -2.02
SSR1P43307 AL161729.4-201ENST00000604650 476 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AC026790.2-201ENST00000606282 430 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
SSR1P43307 AC099654.9-201ENST00000637055 678 ntBASIC2.44□□□□□ -2.02
SSR1P43307 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
SSR1P43307 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
SSR1P43307 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSR1P43307 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SSR1P43307 MTND4P9-201ENST00000507819 1346 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC010329.5-201ENST00000623497 2174 ntBASIC2.43□□□□□ -2.02
SSR1P43307 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSR1P43307 OR5H15-201ENST00000383696 930 ntBASIC2.43□□□□□ -2.02
SSR1P43307 MIR676-201ENST00000390702 67 ntBASIC2.43□□□□□ -2.02
SSR1P43307 NDUFB4P4-201ENST00000404822 243 ntBASIC2.43□□□□□ -2.02
SSR1P43307 MTCO1P17-201ENST00000411522 491 ntBASIC2.43□□□□□ -2.02
SSR1P43307 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.43□□□□□ -2.02
SSR1P43307 AL354692.1-201ENST00000423044 315 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.43□□□□□ -2.02
SSR1P43307 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.43□□□□□ -2.02
SSR1P43307 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 MTND3P1-201ENST00000441336 220 ntBASIC2.43□□□□□ -2.02
SSR1P43307 MTCO3P45-201ENST00000443036 613 ntBASIC2.43□□□□□ -2.02
SSR1P43307 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 AC055731.1-201ENST00000474387 401 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.43□□□□□ -2.02
SSR1P43307 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 RPS27AP10-201ENST00000496103 208 ntBASIC2.43□□□□□ -2.02
SSR1P43307 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
SSR1P43307 GTF2IP9-201ENST00000502460 301 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.43□□□□□ -2.02
SSR1P43307 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.43□□□□□ -2.02
SSR1P43307 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSR1P43307 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.43□□□□□ -2.02
SSR1P43307 AL133153.1-201ENST00000557756 303 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.43□□□□□ -2.02
SSR1P43307 AC009712.1-201ENST00000564938 316 ntBASIC2.43□□□□□ -2.02
SSR1P43307 MIR4509-3-201ENST00000578671 94 ntBASIC2.43□□□□□ -2.02
SSR1P43307 MIR4509-2-201ENST00000583920 94 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC007229.1-201ENST00000590455 412 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC025165.5-201ENST00000602802 578 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC097468.3-201ENST00000607956 456 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC009974.1-201ENST00000608881 455 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AL627230.6-201ENST00000611129 280 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AC013562.2-201ENST00000611632 603 ntBASIC2.43□□□□□ -2.02
SSR1P43307 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.43□□□□□ -2.02
SSR1P43307 MIR4509-1-201ENST00000618224 94 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AP000484.1-201ENST00000620067 1252 ntBASIC2.43□□□□□ -2.02
SSR1P43307 uc_338.20-201ENST00000621563 178 ntBASIC2.43□□□□□ -2.02
SSR1P43307 AL445984.1-201ENST00000637834 659 ntBASIC2.43□□□□□ -2.02
SSR1P43307 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSR1P43307 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SSR1P43307 MTND5P33-201ENST00000571250 1450 ntBASIC2.42□□□□□ -2.02
SSR1P43307 SNORA4.1-201ENST00000364263 144 ntBASIC2.42□□□□□ -2.02
SSR1P43307 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.42□□□□□ -2.02
SSR1P43307 RNU6-757P-201ENST00000410334 100 ntBASIC2.42□□□□□ -2.02
SSR1P43307 PIGPP2-201ENST00000411569 458 ntBASIC2.42□□□□□ -2.02
SSR1P43307 RPL21P24-201ENST00000413752 448 ntBASIC2.42□□□□□ -2.02
SSR1P43307 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.42□□□□□ -2.02
SSR1P43307 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.42□□□□□ -2.02
SSR1P43307 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.42□□□□□ -2.02
SSR1P43307 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.42□□□□□ -2.02
SSR1P43307 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.42□□□□□ -2.02
SSR1P43307 AC104090.1-201ENST00000506341 1171 ntBASIC2.42□□□□□ -2.02
SSR1P43307 HSPE1P23-201ENST00000509838 286 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms