Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL3P39023 AL121601.2-201ENST00000438019 707 ntBASIC3.2□□□□□ -1.9
RPL3P39023 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL3P39023 MTND3P16-201ENST00000452205 344 ntBASIC3.2□□□□□ -1.9
RPL3P39023 RBMY2UP-201ENST00000453474 324 ntBASIC3.2□□□□□ -1.9
RPL3P39023 RNU7-180P-201ENST00000459240 63 ntBASIC3.2□□□□□ -1.9
RPL3P39023 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL3P39023 AP001086.1-201ENST00000494882 321 ntBASIC3.2□□□□□ -1.9
RPL3P39023 RPL38P4-201ENST00000502376 214 ntBASIC3.2□□□□□ -1.9
RPL3P39023 MTCO3P9-201ENST00000506989 781 ntBASIC3.2□□□□□ -1.9
RPL3P39023 AC104806.1-201ENST00000508720 308 ntBASIC3.2□□□□□ -1.9
RPL3P39023 RNU6-507P-201ENST00000516045 100 ntBASIC3.2□□□□□ -1.9
RPL3P39023 RNU6-123P-201ENST00000516163 102 ntBASIC3.2□□□□□ -1.9
RPL3P39023 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
RPL3P39023 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.2□□□□□ -1.9
RPL3P39023 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL3P39023 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL3P39023 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.2□□□□□ -1.9
RPL3P39023 MIR4424-201ENST00000585257 86 ntBASIC3.2□□□□□ -1.9
RPL3P39023 BNIP3P9-201ENST00000603714 553 ntBASIC3.2□□□□□ -1.9
RPL3P39023 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 AC092628.2-201ENST00000622492 339 ntBASIC3.2□□□□□ -1.9
RPL3P39023 AP003122.6-201ENST00000623831 495 ntBASIC3.2□□□□□ -1.9
RPL3P39023 AC009033.1-201ENST00000624279 431 ntBASIC3.2□□□□□ -1.9
RPL3P39023 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL3P39023 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
RPL3P39023 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPL3P39023 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RPL3P39023 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
RPL3P39023 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL3P39023 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL3P39023 SDAD1P2-201ENST00000441308 2028 ntBASIC3.19□□□□□ -1.9
RPL3P39023 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPL3P39023 Y_RNA.86-201ENST00000363020 111 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNA5SP515-201ENST00000364570 118 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNA5SP189-201ENST00000364920 115 ntBASIC3.19□□□□□ -1.9
RPL3P39023 SNORA73.2-201ENST00000364946 201 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL3P39023 SNORA5A-201ENST00000384111 134 ntBASIC3.19□□□□□ -1.9
RPL3P39023 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RPL3P39023 RNU6-550P-201ENST00000391057 101 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNA5SP118-201ENST00000410385 109 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNU2-29P-201ENST00000410423 189 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNU6-1148P-201ENST00000410992 104 ntBASIC3.19□□□□□ -1.9
RPL3P39023 CYCSP19-201ENST00000411715 316 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL3P39023 RPL7P46-201ENST00000425129 740 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RPL7L1P10-201ENST00000427790 463 ntBASIC3.19□□□□□ -1.9
RPL3P39023 VDAC1P3-201ENST00000434069 851 ntBASIC3.19□□□□□ -1.9
RPL3P39023 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
RPL3P39023 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPL3P39023 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 MTND5P20-201ENST00000448677 143 ntBASIC3.19□□□□□ -1.9
RPL3P39023 MTND3P10-201ENST00000450967 341 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC106707.2-201ENST00000484182 374 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC104619.4-201ENST00000510773 249 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RN7SKP13-201ENST00000515933 244 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNU4-29P-201ENST00000515943 174 ntBASIC3.19□□□□□ -1.9
RPL3P39023 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
RPL3P39023 RNU6-685P-201ENST00000517088 95 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPL3P39023 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL3P39023 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL3P39023 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL3P39023 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 MIR5047-201ENST00000579212 100 ntBASIC3.19□□□□□ -1.9
RPL3P39023 MIR3690-201ENST00000580266 75 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.19□□□□□ -1.9
RPL3P39023 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 AC007687.1-201ENST00000602704 304 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC130324.3-201ENST00000614165 542 ntBASIC3.19□□□□□ -1.9
RPL3P39023 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.19□□□□□ -1.9
RPL3P39023 AC090132.2-201ENST00000615881 347 ntBASIC3.19□□□□□ -1.9
RPL3P39023 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.19□□□□□ -1.9
RPL3P39023 U6.114-201ENST00000636407 96 ntBASIC3.19□□□□□ -1.9
RPL3P39023 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 AC009093.8-201ENST00000641769 292 ntBASIC3.19□□□□□ -1.9
RPL3P39023 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL3P39023 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPL3P39023 AL133383.2-201ENST00000622958 2336 ntBASIC3.19□□□□□ -1.9
RPL3P39023 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPL3P39023 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
RPL3P39023 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RPL3P39023 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPL3P39023 ZNF285B-201ENST00000561698 1767 ntBASIC3.18□□□□□ -1.9
RPL3P39023 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPL3P39023 RNU6-288P-201ENST00000363690 104 ntBASIC3.18□□□□□ -1.9
RPL3P39023 Y_RNA.279-201ENST00000364763 95 ntBASIC3.18□□□□□ -1.9
RPL3P39023 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms