Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC12P31275 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC12P31275 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HOXC12P31275 AC008568.2-201ENST00000623862 2313 ntBASIC4.21□□□□□ -1.74
HOXC12P31275 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 AC116096.1-201ENST00000566804 2314 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 RNU6-741P-201ENST00000383889 107 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RNU6-574P-201ENST00000384265 107 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RNU6-196P-201ENST00000384315 107 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 SNORA41-201ENST00000384675 132 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 U3.30-201ENST00000391308 210 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 MIR1183-201ENST00000408856 89 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RN7SKP16-201ENST00000410180 299 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RN7SKP267-201ENST00000410381 285 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RNU6-325P-201ENST00000411132 105 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 ELOCP19-201ENST00000411919 318 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC011933.1-201ENST00000413334 321 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC12P31275 AL096701.2-201ENST00000416920 238 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC12P31275 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC12P31275 RPL23AP1-201ENST00000428990 471 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC12P31275 AL583843.1-201ENST00000456070 346 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC139453.3-201ENST00000493276 369 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC015911.1-201ENST00000495111 156 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC078918.1-201ENST00000498515 228 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC113155.1-201ENST00000511141 769 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC12P31275 RNA5SP249-201ENST00000516127 99 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RPL23AP53-201ENST00000521854 457 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC12P31275 MIR3160-1-201ENST00000577972 85 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 AL121917.1-203ENST00000605534 577 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC12P31275 CDC27P3-201ENST00000635418 1910 ntBASIC4.2□□□□□ -1.74
HOXC12P31275 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC12P31275 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC12P31275 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC12P31275 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC12P31275 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HOXC12P31275 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC12P31275 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
HOXC12P31275 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC12P31275 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC12P31275 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC12P31275 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC12P31275 RNU6-600P-201ENST00000362524 99 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 RNU6-933P-201ENST00000384424 107 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 RN7SKP106-201ENST00000410832 272 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 Y_RNA.623-201ENST00000411128 95 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 BX276092.3-201ENST00000424182 230 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC12P31275 AC093151.1-201ENST00000427711 313 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 TOMM20P4-201ENST00000427861 435 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AC006946.1-201ENST00000429106 328 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC12P31275 MYL8P-204ENST00000431574 518 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AL133396.1-201ENST00000432048 687 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 RPL7AP61-201ENST00000443410 636 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AC009237.8-201ENST00000445492 379 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AL031274.1-201ENST00000450334 232 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC12P31275 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC12P31275 RNA5SP165-201ENST00000517142 115 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AL117187.1-201ENST00000555482 181 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC12P31275 MIR4273-201ENST00000582824 84 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AC093227.2-201ENST00000589357 285 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXC12P31275 AC092447.9-201ENST00000603395 144 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 Z98200.1-201ENST00000607298 470 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC12P31275 MIR6853-201ENST00000619642 74 ntBASIC4.19□□□□□ -1.74
HOXC12P31275 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC12P31275 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HOXC12P31275 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC12P31275 AL731532.2-201ENST00000623542 1953 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC12P31275 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC12P31275 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 MTND5P1-201ENST00000445440 1375 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC12P31275 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC12P31275 SNORA31-201ENST00000362607 130 ntBASIC4.18□□□□□ -1.74
HOXC12P31275 RNA5SP28-201ENST00000363841 119 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms