Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MTND1P28-201ENST00000435623 950 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 ST13P20-201ENST00000447996 1065 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN6P29350 CECR9-201ENST00000453421 199 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.59□□□□□ -1.99
PTPN6P29350 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN6P29350 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.59□□□□□ -1.99
PTPN6P29350 AC068587.2-201ENST00000478386 781 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 RPS29P20-201ENST00000489592 171 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 RPF2P2-201ENST00000504693 896 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN6P29350 RPL23AP94-201ENST00000512518 302 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 SCARNA11.3-201ENST00000517276 130 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN6P29350 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PTPN6P29350 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PTPN6P29350 AC123904.2-201ENST00000548059 300 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN6P29350 MIR3117-201ENST00000584034 78 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 MTCYBP22-201ENST00000603788 447 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC098826.3-201ENST00000603823 466 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC121334.2-201ENST00000605387 271 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PTPN6P29350 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.59□□□□□ -1.99
PTPN6P29350 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN6P29350 AC093591.3-201ENST00000634516 308 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 AC006927.3-201ENST00000638789 384 ntBASIC2.59□□□□□ -1.99
PTPN6P29350 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
PTPN6P29350 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -2
PTPN6P29350 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.58□□□□□ -2
PTPN6P29350 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN6P29350 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN6P29350 RNU6-500P-201ENST00000362349 107 ntBASIC2.58□□□□□ -2
PTPN6P29350 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
PTPN6P29350 RNY3P13-201ENST00000365542 102 ntBASIC2.58□□□□□ -2
PTPN6P29350 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
PTPN6P29350 AL353777.1-201ENST00000425552 326 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC104651.1-201ENST00000427559 735 ntBASIC2.58□□□□□ -2
PTPN6P29350 GPM6BP2-201ENST00000432046 144 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.58□□□□□ -2
PTPN6P29350 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.58□□□□□ -2
PTPN6P29350 RPL36AP6-201ENST00000435770 321 ntBASIC2.58□□□□□ -2
PTPN6P29350 RPS15AP5-201ENST00000436276 388 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.58□□□□□ -2
PTPN6P29350 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.58□□□□□ -2
PTPN6P29350 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.58□□□□□ -2
PTPN6P29350 RPS24P13-201ENST00000442520 397 ntBASIC2.58□□□□□ -2
PTPN6P29350 GPM6BP1-201ENST00000446387 144 ntBASIC2.58□□□□□ -2
PTPN6P29350 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.58□□□□□ -2
PTPN6P29350 AC105252.1-201ENST00000503089 286 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.58□□□□□ -2
PTPN6P29350 AC022447.1-201ENST00000515358 464 ntBASIC2.58□□□□□ -2
PTPN6P29350 RNA5SP471-201ENST00000516971 106 ntBASIC2.58□□□□□ -2
PTPN6P29350 RNU6-201P-201ENST00000517100 61 ntBASIC2.58□□□□□ -2
PTPN6P29350 ELOCP31-201ENST00000540463 467 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
PTPN6P29350 ZNF321P-202ENST00000550843 495 ntBASIC2.58□□□□□ -2
PTPN6P29350 CYCSP39-201ENST00000565821 309 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.58□□□□□ -2
PTPN6P29350 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.58□□□□□ -2
PTPN6P29350 AL161798.1-201ENST00000604630 131 ntBASIC2.58□□□□□ -2
PTPN6P29350 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.58□□□□□ -2
PTPN6P29350 AC131159.1-201ENST00000621854 213 ntBASIC2.58□□□□□ -2
PTPN6P29350 AC017037.3-201ENST00000625016 472 ntBASIC2.58□□□□□ -2
PTPN6P29350 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.58□□□□□ -2
PTPN6P29350 AC010149.2-201ENST00000637608 315 ntBASIC2.58□□□□□ -2
PTPN6P29350 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
PTPN6P29350 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN6P29350 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
PTPN6P29350 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
PTPN6P29350 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
PTPN6P29350 UBE2L2-201ENST00000254302 429 ntBASIC2.57□□□□□ -2
PTPN6P29350 OR5J1P-201ENST00000313544 939 ntBASIC2.57□□□□□ -2
PTPN6P29350 RNU6-701P-201ENST00000384059 107 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC096649.2-201ENST00000416186 393 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.57□□□□□ -2
PTPN6P29350 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
PTPN6P29350 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN6P29350 AL365184.2-201ENST00000431139 435 ntBASIC2.57□□□□□ -2
PTPN6P29350 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
PTPN6P29350 AC118469.1-201ENST00000442943 488 ntBASIC2.57□□□□□ -2
PTPN6P29350 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.57□□□□□ -2
PTPN6P29350 AC004924.1-201ENST00000480160 781 ntBASIC2.57□□□□□ -2
PTPN6P29350 AF131216.2-201ENST00000512316 564 ntBASIC2.57□□□□□ -2
PTPN6P29350 RNA5SP165-201ENST00000517142 115 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.57□□□□□ -2
PTPN6P29350 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
PTPN6P29350 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.57□□□□□ -2
PTPN6P29350 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.57□□□□□ -2
PTPN6P29350 AC091489.2-201ENST00000566263 604 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.57□□□□□ -2
PTPN6P29350 AC090616.3-201ENST00000582184 217 ntBASIC2.57□□□□□ -2
PTPN6P29350 MIR4298-201ENST00000584380 73 ntBASIC2.57□□□□□ -2
PTPN6P29350 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC006023.1-201ENST00000603944 259 ntBASIC2.57□□□□□ -2
PTPN6P29350 AL391813.2-201ENST00000609113 322 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC108747.1-201ENST00000609508 535 ntBASIC2.57□□□□□ -2
PTPN6P29350 AC107294.1-201ENST00000609524 467 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms