Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC055855.1-201ENST00000489563 579 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.72□□□□□ -1.97
PTPN4P29074 MTND5P13-201ENST00000513046 1079 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.72□□□□□ -1.97
PTPN4P29074 SNORA31.18-201ENST00000517043 134 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC025281.1-201ENST00000567026 265 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC012435.1-202ENST00000568772 240 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC010546.1-201ENST00000569391 485 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AL161734.1-201ENST00000609720 557 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTPN4P29074 AC122133.1-201ENST00000613964 233 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 MIR7844-201ENST00000616161 122 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC112204.3-201ENST00000623822 332 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC006927.3-201ENST00000638789 384 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTPN4P29074 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PTPN4P29074 MIR449A-201ENST00000362113 91 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 U8.14-201ENST00000390843 143 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 RNU2-62P-201ENST00000410868 191 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN4P29074 NUP35P1-201ENST00000422734 947 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AC063976.3-201ENST00000426849 329 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AC007919.1-201ENST00000429380 217 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.71□□□□□ -1.98
PTPN4P29074 AC020550.1-201ENST00000447385 163 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN4P29074 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.71□□□□□ -1.98
PTPN4P29074 AC025881.1-201ENST00000518851 512 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 DEFB108A-201ENST00000530110 222 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.71□□□□□ -1.98
PTPN4P29074 PCMTD1P2-201ENST00000565017 355 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 CYCSP39-201ENST00000565821 309 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AC005951.2-201ENST00000576282 495 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN4P29074 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN4P29074 WISP1-OT1-201ENST00000602893 642 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 OR10AB1P-201ENST00000609613 938 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.71□□□□□ -1.98
PTPN4P29074 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.71□□□□□ -1.98
PTPN4P29074 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTPN4P29074 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.71□□□□□ -1.98
PTPN4P29074 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN4P29074 AL136360.1-201ENST00000503377 1900 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC062016.1-201ENST00000355719 319 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PTPN4P29074 RNU1-39P-201ENST00000383897 165 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 Y_RNA.560-201ENST00000384689 102 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.7□□□□□ -1.98
PTPN4P29074 AL031577.2-201ENST00000404133 280 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 RNA5SP181-201ENST00000410246 98 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 RNU6-920P-201ENST00000410926 92 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 MTND2P18-201ENST00000419962 1030 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN4P29074 AC244035.1-201ENST00000430042 390 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 RPL37P21-201ENST00000435890 276 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 GDI2P2-201ENST00000445131 608 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN4P29074 NIPA2P5-201ENST00000452282 464 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 ZNF114P1-201ENST00000453500 292 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC126182.1-201ENST00000478134 357 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 RPS27P27-201ENST00000498779 255 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.7□□□□□ -1.98
PTPN4P29074 RPF2P2-201ENST00000504693 896 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC114786.4-201ENST00000508771 728 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC114797.1-201ENST00000514003 728 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN4P29074 RNU6-1003P-201ENST00000517099 105 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.7□□□□□ -1.98
PTPN4P29074 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN4P29074 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN4P29074 COX6CP5-201ENST00000527162 228 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN4P29074 AC007115.1-201ENST00000546853 234 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.7□□□□□ -1.98
PTPN4P29074 AC008277.2-201ENST00000605196 797 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AC007619.2-201ENST00000605743 379 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN4P29074 AC012150.2-201ENST00000621300 544 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 FRG1KP-201ENST00000623592 341 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 AF246928.1-201ENST00000623768 87 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN4P29074 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
PTPN4P29074 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTPN4P29074 AL359693.1-201ENST00000614959 2407 ntBASIC2.7□□□□□ -1.98
PTPN4P29074 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
PTPN4P29074 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.69□□□□□ -1.98
PTPN4P29074 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.69□□□□□ -1.98
PTPN4P29074 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
PTPN4P29074 RNU6-501P-201ENST00000364072 100 ntBASIC2.69□□□□□ -1.98
PTPN4P29074 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.69□□□□□ -1.98
PTPN4P29074 MIR888-201ENST00000401186 77 ntBASIC2.69□□□□□ -1.98
PTPN4P29074 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTPN4P29074 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.69□□□□□ -1.98
PTPN4P29074 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.69□□□□□ -1.98
PTPN4P29074 USP9YP13-201ENST00000417797 480 ntBASIC2.69□□□□□ -1.98
PTPN4P29074 AC019097.1-201ENST00000424783 735 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms