Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIR5701-1-201ENST00000585138 82 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AL158827.2-201ENST00000602494 330 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AL139395.1-201ENST00000603662 160 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AC107871.2-201ENST00000612894 502 ntBASIC5.28□□□□□ -1.56
RFX1P22670 MIR6780A-201ENST00000615089 68 ntBASIC5.28□□□□□ -1.56
RFX1P22670 MIR5701-2-201ENST00000615634 82 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AL691447.3-201ENST00000635020 330 ntBASIC5.28□□□□□ -1.56
RFX1P22670 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX1P22670 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
RFX1P22670 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 AC107068.1-201ENST00000563286 4218 ntBASIC5.28□□□□□ -1.56
RFX1P22670 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RFX1P22670 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
RFX1P22670 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RFX1P22670 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX1P22670 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
RFX1P22670 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 AC022336.2-201ENST00000568966 2538 ntBASIC5.27□□□□□ -1.57
RFX1P22670 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
RFX1P22670 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
RFX1P22670 Y_RNA.533-201ENST00000384596 114 ntBASIC5.27□□□□□ -1.57
RFX1P22670 MIR625-201ENST00000385047 85 ntBASIC5.27□□□□□ -1.57
RFX1P22670 U3.42-201ENST00000408746 214 ntBASIC5.27□□□□□ -1.57
RFX1P22670 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX1P22670 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX1P22670 VDAC1P3-201ENST00000434069 851 ntBASIC5.27□□□□□ -1.57
RFX1P22670 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX1P22670 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX1P22670 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX1P22670 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX1P22670 RPL30P5-201ENST00000494923 336 ntBASIC5.27□□□□□ -1.57
RFX1P22670 AC083829.1-201ENST00000503756 657 ntBASIC5.27□□□□□ -1.57
RFX1P22670 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
RFX1P22670 RNU6-703P-201ENST00000516946 107 ntBASIC5.27□□□□□ -1.57
RFX1P22670 Y_RNA.715-201ENST00000517082 110 ntBASIC5.27□□□□□ -1.57
RFX1P22670 AC144568.1-201ENST00000520139 137 ntBASIC5.27□□□□□ -1.57
RFX1P22670 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX1P22670 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX1P22670 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX1P22670 SNORA74C-1-201ENST00000580726 201 ntBASIC5.27□□□□□ -1.57
RFX1P22670 AC005046.1-201ENST00000608515 625 ntBASIC5.27□□□□□ -1.57
RFX1P22670 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFX1P22670 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX1P22670 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX1P22670 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX1P22670 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
RFX1P22670 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX1P22670 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RFX1P22670 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX1P22670 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX1P22670 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.26□□□□□ -1.57
RFX1P22670 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX1P22670 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX1P22670 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RFX1P22670 RNU6-595P-201ENST00000363944 107 ntBASIC5.26□□□□□ -1.57
RFX1P22670 SNORA63.7-201ENST00000365579 123 ntBASIC5.26□□□□□ -1.57
RFX1P22670 Y_RNA.512-201ENST00000384518 102 ntBASIC5.26□□□□□ -1.57
RFX1P22670 RNA5SP332-201ENST00000391063 115 ntBASIC5.26□□□□□ -1.57
RFX1P22670 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX1P22670 MIR1271-201ENST00000408537 86 ntBASIC5.26□□□□□ -1.57
RFX1P22670 AC007560.1-201ENST00000426912 237 ntBASIC5.26□□□□□ -1.57
RFX1P22670 AC087650.1-201ENST00000431445 468 ntBASIC5.26□□□□□ -1.57
RFX1P22670 RPL22P13-201ENST00000493291 347 ntBASIC5.26□□□□□ -1.57
RFX1P22670 RN7SKP92-201ENST00000517266 244 ntBASIC5.26□□□□□ -1.57
RFX1P22670 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX1P22670 AC040926.1-201ENST00000530195 238 ntBASIC5.26□□□□□ -1.57
RFX1P22670 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX1P22670 HMGB1P14-201ENST00000557424 591 ntBASIC5.26□□□□□ -1.57
RFX1P22670 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX1P22670 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.26□□□□□ -1.57
RFX1P22670 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.26□□□□□ -1.57
RFX1P22670 U2.1-201ENST00000618978 145 ntBASIC5.26□□□□□ -1.57
RFX1P22670 ZNF72P-201ENST00000425869 1908 ntBASIC5.26□□□□□ -1.57
RFX1P22670 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX1P22670 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX1P22670 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX1P22670 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX1P22670 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX1P22670 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
RFX1P22670 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX1P22670 MTND5P9-201ENST00000503854 1755 ntBASIC5.25□□□□□ -1.57
RFX1P22670 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX1P22670 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX1P22670 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX1P22670 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX1P22670 Y_RNA.210-201ENST00000364161 110 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms