Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ACANP16112 RPL21P103-201ENST00000479921 488 ntBASIC0.6□□□□□ -2.31
ACANP16112 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.6□□□□□ -2.31
ACANP16112 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.6□□□□□ -2.31
ACANP16112 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.6□□□□□ -2.31
ACANP16112 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.6□□□□□ -2.31
ACANP16112 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.6□□□□□ -2.31
ACANP16112 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ACANP16112 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
ACANP16112 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.6□□□□□ -2.31
ACANP16112 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ACANP16112 Y_RNA.488-201ENST00000384403 102 ntBASIC0.6□□□□□ -2.31
ACANP16112 MIR627-201ENST00000384979 97 ntBASIC0.6□□□□□ -2.31
ACANP16112 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.6□□□□□ -2.31
ACANP16112 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.6□□□□□ -2.31
ACANP16112 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.6□□□□□ -2.31
ACANP16112 AC010301.1-201ENST00000473936 355 ntBASIC0.6□□□□□ -2.31
ACANP16112 RNU6-943P-201ENST00000516960 98 ntBASIC0.6□□□□□ -2.31
ACANP16112 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.6□□□□□ -2.31
ACANP16112 FAM106CP-201ENST00000582212 507 ntBASIC0.6□□□□□ -2.31
ACANP16112 HMGB1P24-202ENST00000615653 685 ntBASIC0.6□□□□□ -2.31
ACANP16112 AP003122.6-201ENST00000623831 495 ntBASIC0.6□□□□□ -2.31
ACANP16112 AP001350.1-201ENST00000601906 1524 ntBASIC0.6□□□□□ -2.31
ACANP16112 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
ACANP16112 OR4G2P-201ENST00000328113 903 ntBASIC0.59□□□□□ -2.31
ACANP16112 RNU6-942P-201ENST00000363002 107 ntBASIC0.59□□□□□ -2.31
ACANP16112 Y_RNA.170-201ENST00000363746 110 ntBASIC0.59□□□□□ -2.31
ACANP16112 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
ACANP16112 MIR524-201ENST00000385242 87 ntBASIC0.59□□□□□ -2.31
ACANP16112 RNA5SP252-201ENST00000391131 119 ntBASIC0.59□□□□□ -2.31
ACANP16112 AC019070.1-201ENST00000415008 1024 ntBASIC0.59□□□□□ -2.31
ACANP16112 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.59□□□□□ -2.31
ACANP16112 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.59□□□□□ -2.31
ACANP16112 RPL30P14-201ENST00000482744 348 ntBASIC0.59□□□□□ -2.31
ACANP16112 AC025768.1-201ENST00000510057 267 ntBASIC0.59□□□□□ -2.31
ACANP16112 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.59□□□□□ -2.31
ACANP16112 AL160236.1-201ENST00000556317 195 ntBASIC0.59□□□□□ -2.31
ACANP16112 MIR4636-201ENST00000582271 80 ntBASIC0.59□□□□□ -2.31
ACANP16112 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.59□□□□□ -2.31
ACANP16112 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
ACANP16112 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.59□□□□□ -2.31
ACANP16112 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.59□□□□□ -2.31
ACANP16112 AC024595.1-201ENST00000623088 387 ntBASIC0.59□□□□□ -2.31
ACANP16112 OR4G3P-201ENST00000633500 913 ntBASIC0.59□□□□□ -2.31
ACANP16112 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.31
ACANP16112 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
ACANP16112 RNU6-600P-201ENST00000362524 99 ntBASIC0.59□□□□□ -2.32
ACANP16112 MIR150-201ENST00000385048 84 ntBASIC0.59□□□□□ -2.32
ACANP16112 HNRNPDP2-201ENST00000406475 478 ntBASIC0.59□□□□□ -2.32
ACANP16112 AC098592.2-201ENST00000413158 265 ntBASIC0.59□□□□□ -2.32
ACANP16112 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.59□□□□□ -2.32
ACANP16112 XKRYP1-201ENST00000423438 492 ntBASIC0.59□□□□□ -2.32
ACANP16112 HMGB1P9-201ENST00000429856 646 ntBASIC0.59□□□□□ -2.32
ACANP16112 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
ACANP16112 XKRYP2-201ENST00000432915 492 ntBASIC0.59□□□□□ -2.32
ACANP16112 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.59□□□□□ -2.32
ACANP16112 C1DP3-201ENST00000455013 423 ntBASIC0.59□□□□□ -2.32
ACANP16112 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.59□□□□□ -2.32
ACANP16112 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
ACANP16112 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.59□□□□□ -2.32
ACANP16112 LDHBP3-201ENST00000514909 822 ntBASIC0.59□□□□□ -2.32
ACANP16112 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.59□□□□□ -2.32
ACANP16112 AP000654.2-201ENST00000605633 586 ntBASIC0.59□□□□□ -2.32
ACANP16112 AC145207.9-201ENST00000623802 325 ntBASIC0.59□□□□□ -2.32
ACANP16112 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.59□□□□□ -2.32
ACANP16112 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
ACANP16112 MTND5P11-201ENST00000511037 1812 ntBASIC0.58□□□□□ -2.32
ACANP16112 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
ACANP16112 AC119618.1-201ENST00000434191 222 ntBASIC0.58□□□□□ -2.32
ACANP16112 SNRPEP4-201ENST00000435815 279 ntBASIC0.58□□□□□ -2.32
ACANP16112 AL022238.1-201ENST00000442557 355 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC118469.1-201ENST00000442943 488 ntBASIC0.58□□□□□ -2.32
ACANP16112 AL500527.1-201ENST00000448532 255 ntBASIC0.58□□□□□ -2.32
ACANP16112 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.58□□□□□ -2.32
ACANP16112 AC023824.2-201ENST00000566185 400 ntBASIC0.58□□□□□ -2.32
ACANP16112 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
ACANP16112 RNU6-39P-201ENST00000384344 107 ntBASIC0.58□□□□□ -2.32
ACANP16112 RPL21P66-201ENST00000426566 466 ntBASIC0.58□□□□□ -2.32
ACANP16112 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.58□□□□□ -2.32
ACANP16112 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.58□□□□□ -2.32
ACANP16112 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.58□□□□□ -2.32
ACANP16112 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.58□□□□□ -2.32
ACANP16112 RNU7-26P-201ENST00000458980 63 ntBASIC0.58□□□□□ -2.32
ACANP16112 NAP1L1P3-201ENST00000462291 880 ntBASIC0.58□□□□□ -2.32
ACANP16112 AL135752.1-201ENST00000479477 471 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC026801.1-201ENST00000497178 464 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC020699.1-201ENST00000505161 445 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.58□□□□□ -2.32
ACANP16112 AC022880.1-201ENST00000534017 973 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC022662.1-201ENST00000580252 331 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC106791.2-201ENST00000604680 391 ntBASIC0.58□□□□□ -2.32
ACANP16112 AC025594.3-201ENST00000613068 790 ntBASIC0.58□□□□□ -2.32
ACANP16112 uc_338.22-201ENST00000622722 187 ntBASIC0.58□□□□□ -2.32
ACANP16112 Y_RNA.25-201ENST00000362528 102 ntBASIC0.57□□□□□ -2.32
ACANP16112 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.57□□□□□ -2.32
ACANP16112 HMGN1P10-201ENST00000474557 553 ntBASIC0.57□□□□□ -2.32
ACANP16112 Y_RNA.654-201ENST00000497848 106 ntBASIC0.57□□□□□ -2.32
ACANP16112 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.57□□□□□ -2.32
ACANP16112 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.57□□□□□ -2.32
ACANP16112 AC098591.2-201ENST00000510152 315 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms