Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC098847.1-201ENST00000473094 348 ntBASIC6.38□□□□□ -1.39
CD44P16070 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC6.38□□□□□ -1.39
CD44P16070 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC6.38□□□□□ -1.39
CD44P16070 AC005921.1-201ENST00000510589 286 ntBASIC6.38□□□□□ -1.39
CD44P16070 SNORA18.4-201ENST00000516440 124 ntBASIC6.38□□□□□ -1.39
CD44P16070 RN7SKP277-201ENST00000516895 283 ntBASIC6.38□□□□□ -1.39
CD44P16070 AC096996.1-201ENST00000563813 325 ntBASIC6.38□□□□□ -1.39
CD44P16070 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.38□□□□□ -1.39
CD44P16070 AL356575.1-201ENST00000603008 283 ntBASIC6.38□□□□□ -1.39
CD44P16070 AC025754.2-201ENST00000606491 432 ntBASIC6.38□□□□□ -1.39
CD44P16070 U6.115-201ENST00000636045 103 ntBASIC6.38□□□□□ -1.39
CD44P16070 AL133383.2-201ENST00000622958 2336 ntBASIC6.38□□□□□ -1.39
CD44P16070 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD44P16070 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.38□□□□□ -1.39
CD44P16070 SMG1P6-201ENST00000532337 2930 ntBASIC6.38□□□□□ -1.39
CD44P16070 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD44P16070 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD44P16070 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.37□□□□□ -1.39
CD44P16070 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.37□□□□□ -1.39
CD44P16070 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.37□□□□□ -1.39
CD44P16070 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD44P16070 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD44P16070 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD44P16070 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.37□□□□□ -1.39
CD44P16070 Y_RNA.361-201ENST00000365515 120 ntBASIC6.37□□□□□ -1.39
CD44P16070 U1.1-201ENST00000384101 164 ntBASIC6.37□□□□□ -1.39
CD44P16070 RNA5SP496-201ENST00000391240 109 ntBASIC6.37□□□□□ -1.39
CD44P16070 AL078599.1-201ENST00000402075 293 ntBASIC6.37□□□□□ -1.39
CD44P16070 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.37□□□□□ -1.39
CD44P16070 AC098614.2-201ENST00000426040 255 ntBASIC6.37□□□□□ -1.39
CD44P16070 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
CD44P16070 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.37□□□□□ -1.39
CD44P16070 AC092349.1-201ENST00000504903 310 ntBASIC6.37□□□□□ -1.39
CD44P16070 AL138880.2-201ENST00000616214 239 ntBASIC6.37□□□□□ -1.39
CD44P16070 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.37□□□□□ -1.39
CD44P16070 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CD44P16070 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD44P16070 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CD44P16070 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD44P16070 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CD44P16070 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC6.37□□□□□ -1.39
CD44P16070 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 RN7SKP185-201ENST00000362813 326 ntBASIC6.36□□□□□ -1.39
CD44P16070 RNA5SP514-201ENST00000363717 111 ntBASIC6.36□□□□□ -1.39
CD44P16070 U3.15-201ENST00000365398 212 ntBASIC6.36□□□□□ -1.39
CD44P16070 MIR624-201ENST00000385217 97 ntBASIC6.36□□□□□ -1.39
CD44P16070 RPL11P3-201ENST00000395256 523 ntBASIC6.36□□□□□ -1.39
CD44P16070 RNA5SP31-201ENST00000411144 127 ntBASIC6.36□□□□□ -1.39
CD44P16070 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.36□□□□□ -1.39
CD44P16070 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 HMGB1P37-201ENST00000439613 609 ntBASIC6.36□□□□□ -1.39
CD44P16070 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC6.36□□□□□ -1.39
CD44P16070 AL049874.1-201ENST00000489560 388 ntBASIC6.36□□□□□ -1.39
CD44P16070 AL132838.2-201ENST00000492041 314 ntBASIC6.36□□□□□ -1.39
CD44P16070 AC078817.1-201ENST00000492623 435 ntBASIC6.36□□□□□ -1.39
CD44P16070 SNORA70.12-201ENST00000516084 153 ntBASIC6.36□□□□□ -1.39
CD44P16070 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC6.36□□□□□ -1.39
CD44P16070 AC020895.1-201ENST00000595362 272 ntBASIC6.36□□□□□ -1.39
CD44P16070 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.36□□□□□ -1.39
CD44P16070 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD44P16070 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CD44P16070 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CD44P16070 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.35□□□□□ -1.39
CD44P16070 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.35□□□□□ -1.39
CD44P16070 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CD44P16070 RNA5SP273-201ENST00000362484 113 ntBASIC6.35□□□□□ -1.39
CD44P16070 RNU6-1141P-201ENST00000364520 107 ntBASIC6.35□□□□□ -1.39
CD44P16070 MIR889-201ENST00000401280 79 ntBASIC6.35□□□□□ -1.39
CD44P16070 AC012306.1-201ENST00000423267 114 ntBASIC6.35□□□□□ -1.39
CD44P16070 AC005300.1-201ENST00000428401 373 ntBASIC6.35□□□□□ -1.39
CD44P16070 AL354710.1-201ENST00000453641 246 ntBASIC6.35□□□□□ -1.39
CD44P16070 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.35□□□□□ -1.39
CD44P16070 RNA5SP154-201ENST00000516193 111 ntBASIC6.35□□□□□ -1.39
CD44P16070 RNA5SP153-201ENST00000516498 76 ntBASIC6.35□□□□□ -1.39
CD44P16070 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.35□□□□□ -1.39
CD44P16070 AC084364.2-201ENST00000546924 395 ntBASIC6.35□□□□□ -1.39
CD44P16070 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD44P16070 RPL12P48-201ENST00000605620 304 ntBASIC6.35□□□□□ -1.39
CD44P16070 RNA5SP439-201ENST00000617595 124 ntBASIC6.35□□□□□ -1.39
CD44P16070 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD44P16070 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.35□□□□□ -1.39
CD44P16070 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD44P16070 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.35□□□□□ -1.39
CD44P16070 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.35□□□□□ -1.39
CD44P16070 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CD44P16070 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
CD44P16070 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CD44P16070 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.34□□□□□ -1.39
CD44P16070 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CD44P16070 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CD44P16070 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CD44P16070 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CD44P16070 RNA5SP431-201ENST00000410312 120 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms