Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A3P12111 AC024405.2-202ENST00000532731 184 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 AC079148.1-201ENST00000565944 819 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A3P12111 AC073055.1-201ENST00000456901 1621 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 Z82195.2-201ENST00000612348 18351 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A3P12111 RNU6-302P-201ENST00000365249 107 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 AP005639.2-201ENST00000527592 928 ntBASIC0.78□□□□□ -2.28
COL6A3P12111 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.78□□□□□ -2.28
COL6A3P12111 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
COL6A3P12111 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
COL6A3P12111 SNORD14B-201ENST00000364533 90 ntBASIC0.78□□□□□ -2.29
COL6A3P12111 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.78□□□□□ -2.29
COL6A3P12111 AC079780.1-201ENST00000428259 207 ntBASIC0.78□□□□□ -2.29
COL6A3P12111 AL606489.2-201ENST00000433886 234 ntBASIC0.78□□□□□ -2.29
COL6A3P12111 AL022238.1-201ENST00000442557 355 ntBASIC0.78□□□□□ -2.29
COL6A3P12111 RPS29P28-201ENST00000446439 141 ntBASIC0.78□□□□□ -2.29
COL6A3P12111 AL118508.4-201ENST00000624142 1176 ntBASIC0.78□□□□□ -2.29
COL6A3P12111 SNORA4.3-201ENST00000365564 137 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 RNU6-146P-201ENST00000384602 108 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 RNA5SP63-201ENST00000391225 112 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.77□□□□□ -2.29
COL6A3P12111 SNRPEP4-201ENST00000435815 279 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL6A3P12111 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.77□□□□□ -2.29
COL6A3P12111 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A3P12111 AC006213.5-201ENST00000619673 288 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.77□□□□□ -2.29
COL6A3P12111 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
COL6A3P12111 MIR124-3-201ENST00000384866 87 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 VN1R42P-201ENST00000424651 344 ntBASIC0.77□□□□□ -2.29
COL6A3P12111 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A3P12111 AL442644.1-201ENST00000454390 3105 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 Y_RNA.52-201ENST00000362760 96 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 SNORA8.3-201ENST00000384679 139 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 MIR604-201ENST00000384880 94 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A3P12111 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A3P12111 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A3P12111 AC091965.2-201ENST00000512324 613 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.76□□□□□ -2.29
COL6A3P12111 RNU6-229P-201ENST00000516614 102 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 RNA5SP299-201ENST00000391203 116 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 AL356379.1-201ENST00000414105 126 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 SDCBPP1-201ENST00000440192 890 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A3P12111 AL121769.1-201ENST00000469473 401 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 RNY4-201ENST00000516507 96 ntBASIC0.76□□□□□ -2.29
COL6A3P12111 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.76□□□□□ -2.29
COL6A3P12111 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.76□□□□□ -2.29
COL6A3P12111 Y_RNA.185-201ENST00000363894 100 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 RN7SKP142-201ENST00000411236 328 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 RPS3AP1-201ENST00000413190 320 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 HSPE1P1-201ENST00000421494 318 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 PTENP1-201ENST00000447117 1215 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 RPS27AP8-201ENST00000452665 445 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 SNORD97-201ENST00000459187 142 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.75□□□□□ -2.29
COL6A3P12111 AC240442.1-201ENST00000616055 283 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 AL356057.2-201ENST00000403318 432 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 RNU6-84P-201ENST00000607737 102 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 RNU6-955P-201ENST00000410497 104 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 AC023932.2-201ENST00000603176 175 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 AC245884.12-201ENST00000615364 59 ntBASIC0.75□□□□□ -2.29
COL6A3P12111 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL6A3P12111 SNORA23-201ENST00000365128 182 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
COL6A3P12111 Y_RNA.490-201ENST00000384413 102 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 CISD1P1-201ENST00000393907 327 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 NAP1L1P3-201ENST00000462291 880 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 MRPS17P9-201ENST00000511924 393 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 AC103810.9-201ENST00000606688 112 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 SNORD115-41-201ENST00000363608 82 ntBASIC0.74□□□□□ -2.29
COL6A3P12111 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.74□□□□□ -2.29
COL6A3P12111 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.74□□□□□ -2.29
COL6A3P12111 RAB9AP2-201ENST00000443911 597 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 AC091435.1-201ENST00000505442 584 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 AC004812.1-201ENST00000540773 146 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
COL6A3P12111 CR769776.1-201ENST00000441254 787 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A3P12111 NDUFS5P6-201ENST00000529136 295 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A3P12111 AP000654.2-201ENST00000605633 586 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 AL162373.1-201ENST00000620433 407 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
COL6A3P12111 AC010329.5-201ENST00000623497 2174 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 Y_RNA.203-201ENST00000364106 102 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 RNU6-152P-201ENST00000384037 107 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 Y_RNA.583-201ENST00000391033 113 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 PTGES3P2-201ENST00000407942 482 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 AC092447.6-201ENST00000414578 210 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 RFESDP1-201ENST00000422350 461 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 C1DP3-201ENST00000455013 423 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms