Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
PCNAP12004 NDUFB4P6-201ENST00000436819 366 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 CACYBPP2-201ENST00000453625 678 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC022364.2-201ENST00000457963 554 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.3□□□□□ -1.88
PCNAP12004 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 RNU6-927P-201ENST00000516199 100 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 CASP1P1-201ENST00000526345 212 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.3□□□□□ -1.88
PCNAP12004 AP003034.1-201ENST00000534621 422 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.3□□□□□ -1.88
PCNAP12004 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.3□□□□□ -1.88
PCNAP12004 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
PCNAP12004 HMGB1P6-201ENST00000569046 646 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 AC006557.5-201ENST00000603126 811 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC007621.1-201ENST00000604544 437 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AL158032.1-201ENST00000605401 106 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC068944.2-201ENST00000610373 403 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC039056.2-201ENST00000622261 511 ntBASIC3.3□□□□□ -1.88
PCNAP12004 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
PCNAP12004 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 AC004972.1-201ENST00000623934 2209 ntBASIC3.29□□□□□ -1.88
PCNAP12004 Y_RNA.256-201ENST00000364594 104 ntBASIC3.29□□□□□ -1.88
PCNAP12004 SNORA62.3-201ENST00000365110 153 ntBASIC3.29□□□□□ -1.88
PCNAP12004 Y_RNA.450-201ENST00000384198 113 ntBASIC3.29□□□□□ -1.88
PCNAP12004 Y_RNA.576-201ENST00000384781 102 ntBASIC3.29□□□□□ -1.88
PCNAP12004 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCNAP12004 AL356967.1-201ENST00000406305 431 ntBASIC3.29□□□□□ -1.88
PCNAP12004 MIR1290-201ENST00000408735 78 ntBASIC3.29□□□□□ -1.88
PCNAP12004 RPS29P4-201ENST00000414733 161 ntBASIC3.29□□□□□ -1.88
PCNAP12004 OR51A5P-201ENST00000415429 942 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AL356968.1-201ENST00000416622 474 ntBASIC3.29□□□□□ -1.88
PCNAP12004 MRPL50P2-201ENST00000416821 482 ntBASIC3.29□□□□□ -1.88
PCNAP12004 SYF2P2-201ENST00000417620 583 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 MTCYBP8-201ENST00000422855 651 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 MTCO3P30-201ENST00000426425 670 ntBASIC3.29□□□□□ -1.88
PCNAP12004 TAAR7P-201ENST00000436141 242 ntBASIC3.29□□□□□ -1.88
PCNAP12004 MTND4P25-201ENST00000441039 533 ntBASIC3.29□□□□□ -1.88
PCNAP12004 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.29□□□□□ -1.88
PCNAP12004 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 PIGFP3-201ENST00000441918 722 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
PCNAP12004 RNU7-63P-201ENST00000459054 62 ntBASIC3.29□□□□□ -1.88
PCNAP12004 KC877373.1-201ENST00000479066 408 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC092436.1-201ENST00000506450 503 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 AC002456.2-201ENST00000509356 380 ntBASIC3.29□□□□□ -1.88
PCNAP12004 RNU6-123P-201ENST00000516163 102 ntBASIC3.29□□□□□ -1.88
PCNAP12004 Y_RNA.689-201ENST00000516589 107 ntBASIC3.29□□□□□ -1.88
PCNAP12004 RN7SKP282-201ENST00000516824 299 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
PCNAP12004 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCNAP12004 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCNAP12004 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.29□□□□□ -1.88
PCNAP12004 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.29□□□□□ -1.88
PCNAP12004 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.29□□□□□ -1.88
PCNAP12004 AC025678.1-201ENST00000567861 338 ntBASIC3.29□□□□□ -1.88
PCNAP12004 MIR4775-201ENST00000581168 75 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AL354950.2-201ENST00000617939 290 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC007998.5-201ENST00000622938 237 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC011155.2-201ENST00000623202 216 ntBASIC3.29□□□□□ -1.88
PCNAP12004 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
PCNAP12004 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PCNAP12004 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.29□□□□□ -1.88
PCNAP12004 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCNAP12004 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 UBE2L2-201ENST00000254302 429 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RNU4-35P-201ENST00000362588 141 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RNU6-512P-201ENST00000364438 103 ntBASIC3.28□□□□□ -1.88
PCNAP12004 SNORD115-7-201ENST00000365306 82 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RNU6-1029P-201ENST00000384109 107 ntBASIC3.28□□□□□ -1.88
PCNAP12004 MIR134-201ENST00000385258 73 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RNU6-1197P-201ENST00000391183 107 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
PCNAP12004 TIMM9P3-201ENST00000428659 274 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AL356867.1-201ENST00000429623 299 ntBASIC3.28□□□□□ -1.88
PCNAP12004 ATP5JP1-201ENST00000431631 322 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AL139415.2-201ENST00000431968 163 ntBASIC3.28□□□□□ -1.88
PCNAP12004 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.28□□□□□ -1.88
PCNAP12004 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
PCNAP12004 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.28□□□□□ -1.88
PCNAP12004 AC122718.1-201ENST00000439448 744 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AC009237.8-201ENST00000445492 379 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RPL21P23-201ENST00000446654 460 ntBASIC3.28□□□□□ -1.88
PCNAP12004 PRDX3P3-201ENST00000447765 522 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms