Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TPM1P09493 AC006199.1-201ENST00000548728 219 ntBASIC2.08□□□□□ -2.08
TPM1P09493 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.08□□□□□ -2.08
TPM1P09493 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.08□□□□□ -2.08
TPM1P09493 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
TPM1P09493 AC008555.8-201ENST00000623602 2168 ntBASIC2.08□□□□□ -2.08
TPM1P09493 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.07□□□□□ -2.08
TPM1P09493 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TPM1P09493 RNU6-97P-201ENST00000363387 104 ntBASIC2.07□□□□□ -2.08
TPM1P09493 AL590084.2-201ENST00000401481 382 ntBASIC2.07□□□□□ -2.08
TPM1P09493 RN7SKP32-201ENST00000410167 303 ntBASIC2.07□□□□□ -2.08
TPM1P09493 RNU2-42P-201ENST00000410697 113 ntBASIC2.07□□□□□ -2.08
TPM1P09493 RNU2-63P-201ENST00000410792 194 ntBASIC2.07□□□□□ -2.08
TPM1P09493 XKRYP1-201ENST00000423438 492 ntBASIC2.07□□□□□ -2.08
TPM1P09493 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
TPM1P09493 XKRYP2-201ENST00000432915 492 ntBASIC2.07□□□□□ -2.08
TPM1P09493 NANOGP2-201ENST00000435391 727 ntBASIC2.07□□□□□ -2.08
TPM1P09493 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.07□□□□□ -2.08
TPM1P09493 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
TPM1P09493 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.07□□□□□ -2.08
TPM1P09493 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.07□□□□□ -2.08
TPM1P09493 AC093281.2-201ENST00000510153 597 ntBASIC2.07□□□□□ -2.08
TPM1P09493 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.07□□□□□ -2.08
TPM1P09493 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.07□□□□□ -2.08
TPM1P09493 MTCO3P15-201ENST00000526563 574 ntBASIC2.07□□□□□ -2.08
TPM1P09493 MIR3167-201ENST00000579623 85 ntBASIC2.07□□□□□ -2.08
TPM1P09493 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.07□□□□□ -2.08
TPM1P09493 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TPM1P09493 TUG1_2.1-201ENST00000614234 87 ntBASIC2.07□□□□□ -2.08
TPM1P09493 AC009233.1-201ENST00000616477 371 ntBASIC2.07□□□□□ -2.08
TPM1P09493 AC078880.5-201ENST00000617845 421 ntBASIC2.07□□□□□ -2.08
TPM1P09493 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.07□□□□□ -2.08
TPM1P09493 AC079416.3-201ENST00000624479 549 ntBASIC2.07□□□□□ -2.08
TPM1P09493 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TPM1P09493 ADAM3A-203ENST00000461344 2157 ntBASIC2.07□□□□□ -2.08
TPM1P09493 MTND5P29-201ENST00000458676 1807 ntBASIC2.07□□□□□ -2.08
TPM1P09493 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TPM1P09493 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
TPM1P09493 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
TPM1P09493 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TPM1P09493 SNORA11.1-201ENST00000408133 129 ntBASIC2.06□□□□□ -2.08
TPM1P09493 RPL31P63-201ENST00000422565 375 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.06□□□□□ -2.08
TPM1P09493 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.06□□□□□ -2.08
TPM1P09493 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
TPM1P09493 PTGES3P1-201ENST00000439531 483 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AL161651.1-201ENST00000440882 223 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AL096829.2-201ENST00000446582 742 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.06□□□□□ -2.08
TPM1P09493 CECR9-201ENST00000453421 199 ntBASIC2.06□□□□□ -2.08
TPM1P09493 RPL23AP3-201ENST00000453844 468 ntBASIC2.06□□□□□ -2.08
TPM1P09493 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
TPM1P09493 MTAPP1-201ENST00000489154 819 ntBASIC2.06□□□□□ -2.08
TPM1P09493 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.06□□□□□ -2.08
TPM1P09493 HMGB1P28-201ENST00000507778 552 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AC008837.1-201ENST00000511513 412 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.06□□□□□ -2.08
TPM1P09493 SNORA31.23-201ENST00000517219 133 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.06□□□□□ -2.08
TPM1P09493 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.06□□□□□ -2.08
TPM1P09493 AL445435.1-201ENST00000604232 665 ntBASIC2.06□□□□□ -2.08
TPM1P09493 AC103710.1-201ENST00000610003 901 ntBASIC2.06□□□□□ -2.08
TPM1P09493 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
TPM1P09493 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TPM1P09493 XGY1-201ENST00000381172 446 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AL079342.2-201ENST00000403367 482 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
TPM1P09493 RNU2-20P-201ENST00000410425 191 ntBASIC2.05□□□□□ -2.08
TPM1P09493 MTND1P21-201ENST00000412991 285 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AC096920.1-201ENST00000423991 241 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.05□□□□□ -2.08
TPM1P09493 RPL35AP22-201ENST00000436855 335 ntBASIC2.05□□□□□ -2.08
TPM1P09493 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM1P09493 BX322784.1-201ENST00000455793 1077 ntBASIC2.05□□□□□ -2.08
TPM1P09493 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TPM1P09493 AC021382.1-201ENST00000483523 359 ntBASIC2.05□□□□□ -2.08
TPM1P09493 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM1P09493 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM1P09493 RNA5SP137-201ENST00000516833 135 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM1P09493 AP002770.2-201ENST00000543613 532 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AC007375.1-201ENST00000554513 578 ntBASIC2.05□□□□□ -2.08
TPM1P09493 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
TPM1P09493 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AC005034.5-201ENST00000604219 466 ntBASIC2.05□□□□□ -2.08
TPM1P09493 OR1S1-201ENST00000624470 978 ntBASIC2.05□□□□□ -2.08
TPM1P09493 AC103710.2-202ENST00000641454 2853 ntBASIC2.05□□□□□ -2.08
TPM1P09493 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TPM1P09493 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.04□□□□□ -2.08
TPM1P09493 RNU6-1207P-201ENST00000384343 107 ntBASIC2.04□□□□□ -2.08
TPM1P09493 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
TPM1P09493 MIR147B-201ENST00000390185 80 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AL356421.1-201ENST00000403255 413 ntBASIC2.04□□□□□ -2.08
TPM1P09493 PTGES3P2-201ENST00000407942 482 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
TPM1P09493 RPL17P35-201ENST00000432217 549 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AC010153.1-201ENST00000432862 727 ntBASIC2.04□□□□□ -2.08
TPM1P09493 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TPM1P09493 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms