Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNU6-1120P-201ENST00000362988 108 ntBASIC3.03□□□□□ -1.92
CD48P09326 Y_RNA.88-201ENST00000363029 99 ntBASIC3.03□□□□□ -1.92
CD48P09326 MIR124-3-201ENST00000384866 87 ntBASIC3.03□□□□□ -1.92
CD48P09326 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CD48P09326 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.03□□□□□ -1.92
CD48P09326 MTATP6P18-201ENST00000417994 673 ntBASIC3.03□□□□□ -1.92
CD48P09326 AL353193.1-201ENST00000421444 268 ntBASIC3.03□□□□□ -1.92
CD48P09326 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.03□□□□□ -1.92
CD48P09326 OR4K11P-201ENST00000431829 904 ntBASIC3.03□□□□□ -1.92
CD48P09326 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.03□□□□□ -1.92
CD48P09326 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 AC079781.2-201ENST00000446424 169 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CD48P09326 AC079382.1-201ENST00000493346 557 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.03□□□□□ -1.92
CD48P09326 AC116353.2-201ENST00000505332 712 ntBASIC3.03□□□□□ -1.92
CD48P09326 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.03□□□□□ -1.92
CD48P09326 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 RNU6-798P-201ENST00000516912 103 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC100870.1-201ENST00000522035 505 ntBASIC3.03□□□□□ -1.92
CD48P09326 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 AC104383.1-201ENST00000530297 370 ntBASIC3.03□□□□□ -1.92
CD48P09326 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.03□□□□□ -1.92
CD48P09326 SUB1P2-201ENST00000556401 297 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.03□□□□□ -1.92
CD48P09326 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.03□□□□□ -1.92
CD48P09326 AC006504.3-201ENST00000586818 523 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 AL136363.1-201ENST00000605349 337 ntBASIC3.03□□□□□ -1.92
CD48P09326 AL627309.6-201ENST00000606857 840 ntBASIC3.03□□□□□ -1.92
CD48P09326 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 AL442067.2-201ENST00000614033 363 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC002553.4-201ENST00000616896 331 ntBASIC3.03□□□□□ -1.92
CD48P09326 AC006338.1-201ENST00000618453 749 ntBASIC3.03□□□□□ -1.92
CD48P09326 MIR8057-201ENST00000620957 69 ntBASIC3.03□□□□□ -1.92
CD48P09326 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
CD48P09326 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CD48P09326 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD48P09326 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 U3.15-201ENST00000365398 212 ntBASIC3.02□□□□□ -1.93
CD48P09326 Y_RNA.409-201ENST00000383990 98 ntBASIC3.02□□□□□ -1.93
CD48P09326 RNU6-432P-201ENST00000384196 109 ntBASIC3.02□□□□□ -1.93
CD48P09326 Y_RNA.453-201ENST00000384223 109 ntBASIC3.02□□□□□ -1.93
CD48P09326 RNU6-780P-201ENST00000391030 104 ntBASIC3.02□□□□□ -1.93
CD48P09326 AL109755.1-201ENST00000401791 649 ntBASIC3.02□□□□□ -1.93
CD48P09326 NDUFB4P4-201ENST00000404822 243 ntBASIC3.02□□□□□ -1.93
CD48P09326 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
CD48P09326 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.02□□□□□ -1.93
CD48P09326 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.02□□□□□ -1.93
CD48P09326 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.02□□□□□ -1.93
CD48P09326 MTCO3P18-201ENST00000440206 761 ntBASIC3.02□□□□□ -1.93
CD48P09326 AC005094.1-201ENST00000440420 368 ntBASIC3.02□□□□□ -1.93
CD48P09326 MTND4P18-201ENST00000447010 465 ntBASIC3.02□□□□□ -1.93
CD48P09326 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.02□□□□□ -1.93
CD48P09326 AC022364.2-201ENST00000457963 554 ntBASIC3.02□□□□□ -1.93
CD48P09326 SNORA59A-201ENST00000459326 152 ntBASIC3.02□□□□□ -1.93
CD48P09326 AL049714.1-201ENST00000466686 347 ntBASIC3.02□□□□□ -1.93
CD48P09326 RPL31P58-201ENST00000469001 379 ntBASIC3.02□□□□□ -1.93
CD48P09326 SNRPGP3-201ENST00000469405 227 ntBASIC3.02□□□□□ -1.93
CD48P09326 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.02□□□□□ -1.93
CD48P09326 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.02□□□□□ -1.93
CD48P09326 RNU2-10P-201ENST00000516375 211 ntBASIC3.02□□□□□ -1.93
CD48P09326 SCARNA24.1-201ENST00000516465 137 ntBASIC3.02□□□□□ -1.93
CD48P09326 RNU6-1220P-201ENST00000517126 108 ntBASIC3.02□□□□□ -1.93
CD48P09326 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.02□□□□□ -1.93
CD48P09326 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.02□□□□□ -1.93
CD48P09326 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.02□□□□□ -1.93
CD48P09326 AC109635.3-201ENST00000529536 185 ntBASIC3.02□□□□□ -1.93
CD48P09326 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.02□□□□□ -1.93
CD48P09326 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.02□□□□□ -1.93
CD48P09326 AC126177.3-201ENST00000551839 688 ntBASIC3.02□□□□□ -1.93
CD48P09326 AL512360.1-201ENST00000555346 234 ntBASIC3.02□□□□□ -1.93
CD48P09326 AC034105.3-201ENST00000565294 442 ntBASIC3.02□□□□□ -1.93
CD48P09326 AP002360.4-201ENST00000606980 481 ntBASIC3.02□□□□□ -1.93
CD48P09326 AC139792.3-201ENST00000623525 224 ntBASIC3.02□□□□□ -1.93
CD48P09326 AC019226.1-201ENST00000625666 515 ntBASIC3.02□□□□□ -1.93
CD48P09326 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD48P09326 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CD48P09326 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD48P09326 GABRG2-229ENST00000641017 3628 ntBASIC3.01□□□□□ -1.93
CD48P09326 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CD48P09326 FAM35BP-202ENST00000497389 3337 ntBASIC3.01□□□□□ -1.93
CD48P09326 HSPE1P11-201ENST00000339579 310 ntBASIC3.01□□□□□ -1.93
CD48P09326 MIR422A-201ENST00000362286 90 ntBASIC3.01□□□□□ -1.93
CD48P09326 RNU1-35P-201ENST00000362782 153 ntBASIC3.01□□□□□ -1.93
CD48P09326 SNORD56.2-201ENST00000363242 71 ntBASIC3.01□□□□□ -1.93
CD48P09326 RNU6-1322P-201ENST00000364309 107 ntBASIC3.01□□□□□ -1.93
CD48P09326 RNU6-74P-201ENST00000384235 107 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms