Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL035425.3-201ENST00000564206 4996 ntBASIC2.86□□□□□ -1.95
VIMP08670 RNU6-778P-201ENST00000363269 103 ntBASIC2.86□□□□□ -1.95
VIMP08670 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.86□□□□□ -1.95
VIMP08670 RNU6-817P-201ENST00000391083 104 ntBASIC2.86□□□□□ -1.95
VIMP08670 RNU6-193P-201ENST00000410977 107 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.86□□□□□ -1.95
VIMP08670 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.86□□□□□ -1.95
VIMP08670 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.86□□□□□ -1.95
VIMP08670 AC005300.1-201ENST00000428401 373 ntBASIC2.86□□□□□ -1.95
VIMP08670 AL592045.1-201ENST00000429867 352 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC097713.2-201ENST00000430199 356 ntBASIC2.86□□□□□ -1.95
VIMP08670 MTATP6P17-201ENST00000431030 672 ntBASIC2.86□□□□□ -1.95
VIMP08670 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.86□□□□□ -1.95
VIMP08670 RPS15AP5-201ENST00000436276 388 ntBASIC2.86□□□□□ -1.95
VIMP08670 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.86□□□□□ -1.95
VIMP08670 PGBD4P3-201ENST00000440731 581 ntBASIC2.86□□□□□ -1.95
VIMP08670 ST13P20-201ENST00000447996 1065 ntBASIC2.86□□□□□ -1.95
VIMP08670 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VIMP08670 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.86□□□□□ -1.95
VIMP08670 MTCO2P29-201ENST00000465212 189 ntBASIC2.86□□□□□ -1.95
VIMP08670 NDUFB4P2-201ENST00000509515 391 ntBASIC2.86□□□□□ -1.95
VIMP08670 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.86□□□□□ -1.95
VIMP08670 AC118465.1-201ENST00000513820 1271 ntBASIC2.86□□□□□ -1.95
VIMP08670 RNU1-103P-201ENST00000516502 125 ntBASIC2.86□□□□□ -1.95
VIMP08670 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.86□□□□□ -1.95
VIMP08670 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.86□□□□□ -1.95
VIMP08670 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.86□□□□□ -1.95
VIMP08670 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.86□□□□□ -1.95
VIMP08670 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.86□□□□□ -1.95
VIMP08670 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.86□□□□□ -1.95
VIMP08670 AC025281.1-201ENST00000567026 265 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC015871.2-201ENST00000603605 948 ntBASIC2.86□□□□□ -1.95
VIMP08670 AL355877.2-201ENST00000603670 358 ntBASIC2.86□□□□□ -1.95
VIMP08670 AL035413.2-201ENST00000604801 525 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC012468.1-201ENST00000604888 430 ntBASIC2.86□□□□□ -1.95
VIMP08670 DUSP12P1-201ENST00000612874 516 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC025594.3-201ENST00000613068 790 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC007998.5-201ENST00000622938 237 ntBASIC2.86□□□□□ -1.95
VIMP08670 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VIMP08670 AC018692.3-201ENST00000623929 123 ntBASIC2.86□□□□□ -1.95
VIMP08670 AL603839.4-201ENST00000624658 1005 ntBASIC2.86□□□□□ -1.95
VIMP08670 AC080100.1-201ENST00000624239 5356 ntBASIC2.86□□□□□ -1.95
VIMP08670 AL137003.2-201ENST00000606924 2538 ntBASIC2.86□□□□□ -1.95
VIMP08670 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VIMP08670 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VIMP08670 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VIMP08670 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VIMP08670 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.85□□□□□ -1.95
VIMP08670 GNG5P1-201ENST00000255500 204 ntBASIC2.85□□□□□ -1.95
VIMP08670 SNORD56.2-201ENST00000363242 71 ntBASIC2.85□□□□□ -1.95
VIMP08670 RNA5SP72-201ENST00000364442 117 ntBASIC2.85□□□□□ -1.95
VIMP08670 RNA5SP479-201ENST00000364858 117 ntBASIC2.85□□□□□ -1.95
VIMP08670 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
VIMP08670 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VIMP08670 RNU2-49P-201ENST00000410666 184 ntBASIC2.85□□□□□ -1.95
VIMP08670 RPS12P24-201ENST00000412619 387 ntBASIC2.85□□□□□ -1.95
VIMP08670 BPY2DP-201ENST00000422208 265 ntBASIC2.85□□□□□ -1.95
VIMP08670 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
VIMP08670 AC137499.1-201ENST00000427602 88 ntBASIC2.85□□□□□ -1.95
VIMP08670 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.85□□□□□ -1.95
VIMP08670 MTND6P13-201ENST00000443510 523 ntBASIC2.85□□□□□ -1.95
VIMP08670 RPS15AP27-201ENST00000449183 343 ntBASIC2.85□□□□□ -1.95
VIMP08670 RPS27AP8-201ENST00000452665 445 ntBASIC2.85□□□□□ -1.95
VIMP08670 SNRPGP9-201ENST00000456025 225 ntBASIC2.85□□□□□ -1.95
VIMP08670 SNRPFP4-201ENST00000456366 242 ntBASIC2.85□□□□□ -1.95
VIMP08670 RNU6-953P-201ENST00000459154 107 ntBASIC2.85□□□□□ -1.95
VIMP08670 RPL31P41-201ENST00000477967 372 ntBASIC2.85□□□□□ -1.95
VIMP08670 RPL39P36-201ENST00000490784 156 ntBASIC2.85□□□□□ -1.95
VIMP08670 AC139453.3-201ENST00000493276 369 ntBASIC2.85□□□□□ -1.95
VIMP08670 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.85□□□□□ -1.95
VIMP08670 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.85□□□□□ -1.95
VIMP08670 AC119751.5-201ENST00000514077 770 ntBASIC2.85□□□□□ -1.95
VIMP08670 RNU7-51P-201ENST00000516560 62 ntBASIC2.85□□□□□ -1.95
VIMP08670 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.85□□□□□ -1.95
VIMP08670 SUB1P1-201ENST00000524415 382 ntBASIC2.85□□□□□ -1.95
VIMP08670 AC005498.1-201ENST00000592125 465 ntBASIC2.85□□□□□ -1.95
VIMP08670 RPL12P50-201ENST00000603116 116 ntBASIC2.85□□□□□ -1.95
VIMP08670 AC121247.2-201ENST00000604776 136 ntBASIC2.85□□□□□ -1.95
VIMP08670 AL137843.1-201ENST00000605078 385 ntBASIC2.85□□□□□ -1.95
VIMP08670 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VIMP08670 AC091304.9-201ENST00000612091 226 ntBASIC2.85□□□□□ -1.95
VIMP08670 AL365204.3-201ENST00000612448 685 ntBASIC2.85□□□□□ -1.95
VIMP08670 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.85□□□□□ -1.95
VIMP08670 MTND5P42-201ENST00000637720 498 ntBASIC2.85□□□□□ -1.95
VIMP08670 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VIMP08670 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
VIMP08670 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 MTCO1P12-201ENST00000414273 1543 ntBASIC2.84□□□□□ -1.95
VIMP08670 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VIMP08670 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 ZNF519P1-201ENST00000449011 1626 ntBASIC2.84□□□□□ -1.95
VIMP08670 HSPE1P11-201ENST00000339579 310 ntBASIC2.84□□□□□ -1.95
VIMP08670 RNU6-960P-201ENST00000364056 120 ntBASIC2.84□□□□□ -1.95
VIMP08670 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 DEFA7P-201ENST00000382676 285 ntBASIC2.84□□□□□ -1.95
VIMP08670 RNU6-946P-201ENST00000383878 107 ntBASIC2.84□□□□□ -1.95
VIMP08670 SNORD116-8-201ENST00000384365 95 ntBASIC2.84□□□□□ -1.95
VIMP08670 MIR7-3-201ENST00000384898 110 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms