Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC113139.1-201ENST00000605049 239 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC092807.2-201ENST00000609367 243 ntBASIC3.8□□□□□ -1.8
RHOP08100 MIR7851-201ENST00000610611 160 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC104237.2-201ENST00000612456 443 ntBASIC3.8□□□□□ -1.8
RHOP08100 AL450472.3-201ENST00000615578 367 ntBASIC3.8□□□□□ -1.8
RHOP08100 AL355365.1-201ENST00000616480 294 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC110801.1-201ENST00000623590 212 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.8□□□□□ -1.8
RHOP08100 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
RHOP08100 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.8□□□□□ -1.8
RHOP08100 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHOP08100 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHOP08100 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RHOP08100 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 Y_RNA.58-201ENST00000362807 102 ntBASIC3.79□□□□□ -1.8
RHOP08100 Y_RNA.154-201ENST00000363624 102 ntBASIC3.79□□□□□ -1.8
RHOP08100 RNY3P1-201ENST00000365085 102 ntBASIC3.79□□□□□ -1.8
RHOP08100 RNY3-201ENST00000365484 102 ntBASIC3.79□□□□□ -1.8
RHOP08100 RNU6-946P-201ENST00000383878 107 ntBASIC3.79□□□□□ -1.8
RHOP08100 Y_RNA.490-201ENST00000384413 102 ntBASIC3.79□□□□□ -1.8
RHOP08100 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RHOP08100 UBE2V1P2-201ENST00000397758 440 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.79□□□□□ -1.8
RHOP08100 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.79□□□□□ -1.8
RHOP08100 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.79□□□□□ -1.8
RHOP08100 AL121871.1-201ENST00000443413 436 ntBASIC3.79□□□□□ -1.8
RHOP08100 RBMY2UP-201ENST00000453474 324 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 AC008155.2-201ENST00000464337 397 ntBASIC3.79□□□□□ -1.8
RHOP08100 RN7SL601P-201ENST00000471221 293 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.79□□□□□ -1.8
RHOP08100 MTCO1P29-201ENST00000496868 288 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC078918.1-201ENST00000498515 228 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC104806.1-201ENST00000508720 308 ntBASIC3.79□□□□□ -1.8
RHOP08100 RNU6-864P-201ENST00000516256 108 ntBASIC3.79□□□□□ -1.8
RHOP08100 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.79□□□□□ -1.8
RHOP08100 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.79□□□□□ -1.8
RHOP08100 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.79□□□□□ -1.8
RHOP08100 AC093012.1-202ENST00000549403 582 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.79□□□□□ -1.8
RHOP08100 AC026464.5-201ENST00000562497 722 ntBASIC3.79□□□□□ -1.8
RHOP08100 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.79□□□□□ -1.8
RHOP08100 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.79□□□□□ -1.8
RHOP08100 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.79□□□□□ -1.8
RHOP08100 AC004696.1-201ENST00000614345 607 ntBASIC3.79□□□□□ -1.8
RHOP08100 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHOP08100 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 AL353748.2-201ENST00000622148 471 ntBASIC3.79□□□□□ -1.8
RHOP08100 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.79□□□□□ -1.8
RHOP08100 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RHOP08100 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHOP08100 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RHOP08100 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHOP08100 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
RHOP08100 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHOP08100 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 Y_RNA.67-201ENST00000362870 100 ntBASIC3.78□□□□□ -1.8
RHOP08100 RNU6-1287P-201ENST00000362914 107 ntBASIC3.78□□□□□ -1.8
RHOP08100 RNU1-33P-201ENST00000364249 162 ntBASIC3.78□□□□□ -1.8
RHOP08100 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
RHOP08100 SNORA23-201ENST00000365128 182 ntBASIC3.78□□□□□ -1.8
RHOP08100 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 Y_RNA.414-201ENST00000384011 101 ntBASIC3.78□□□□□ -1.8
RHOP08100 RNU6-1060P-201ENST00000384664 107 ntBASIC3.78□□□□□ -1.8
RHOP08100 RNU6-550P-201ENST00000391057 101 ntBASIC3.78□□□□□ -1.8
RHOP08100 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.78□□□□□ -1.8
RHOP08100 HLFP1-201ENST00000402375 499 ntBASIC3.78□□□□□ -1.8
RHOP08100 SSXP9-201ENST00000417503 292 ntBASIC3.78□□□□□ -1.8
RHOP08100 AC093106.2-201ENST00000428212 385 ntBASIC3.78□□□□□ -1.8
RHOP08100 AC087650.1-201ENST00000431445 468 ntBASIC3.78□□□□□ -1.8
RHOP08100 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.78□□□□□ -1.8
RHOP08100 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.78□□□□□ -1.8
RHOP08100 AC004866.2-201ENST00000438285 481 ntBASIC3.78□□□□□ -1.8
RHOP08100 RPL21P10-201ENST00000463521 490 ntBASIC3.78□□□□□ -1.8
RHOP08100 TRBV12-2-201ENST00000489763 344 ntBASIC3.78□□□□□ -1.8
RHOP08100 RPL23AP55-201ENST00000498163 452 ntBASIC3.78□□□□□ -1.8
RHOP08100 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.78□□□□□ -1.8
RHOP08100 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 SCARNA15.1-201ENST00000516384 125 ntBASIC3.78□□□□□ -1.8
RHOP08100 AP001804.3-201ENST00000525146 880 ntBASIC3.78□□□□□ -1.8
RHOP08100 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.78□□□□□ -1.8
RHOP08100 AC126177.3-201ENST00000551839 688 ntBASIC3.78□□□□□ -1.8
RHOP08100 AL121576.1-201ENST00000556055 276 ntBASIC3.78□□□□□ -1.8
RHOP08100 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
RHOP08100 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
RHOP08100 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.78□□□□□ -1.8
RHOP08100 MIR5583-1-201ENST00000580941 59 ntBASIC3.78□□□□□ -1.8
RHOP08100 AF038458.1-201ENST00000588406 262 ntBASIC3.78□□□□□ -1.8
RHOP08100 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.78□□□□□ -1.8
RHOP08100 MIR3651-201ENST00000630427 90 ntBASIC3.78□□□□□ -1.8
RHOP08100 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 AC008725.1-201ENST00000605123 2263 ntBASIC3.78□□□□□ -1.8
RHOP08100 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.78□□□□□ -1.8
RHOP08100 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHOP08100 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms