Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 U2.21-201ENST00000637295 81 ntBASIC1.91□□□□□ -2.1
TPM3P06753 AL359854.1-201ENST00000614203 1594 ntBASIC1.9□□□□□ -2.1
TPM3P06753 RNU6-1300P-201ENST00000391046 108 ntBASIC1.9□□□□□ -2.11
TPM3P06753 HMGN2P39-201ENST00000398005 273 ntBASIC1.9□□□□□ -2.11
TPM3P06753 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
TPM3P06753 AL451054.2-201ENST00000420896 202 ntBASIC1.9□□□□□ -2.11
TPM3P06753 AL139415.2-201ENST00000431968 163 ntBASIC1.9□□□□□ -2.11
TPM3P06753 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.9□□□□□ -2.11
TPM3P06753 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
TPM3P06753 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.9□□□□□ -2.11
TPM3P06753 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.9□□□□□ -2.11
TPM3P06753 MIR4789-201ENST00000577469 82 ntBASIC1.9□□□□□ -2.11
TPM3P06753 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
TPM3P06753 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.9□□□□□ -2.11
TPM3P06753 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.9□□□□□ -2.11
TPM3P06753 AC005261.5-201ENST00000596280 355 ntBASIC1.9□□□□□ -2.11
TPM3P06753 AL357094.1-201ENST00000603845 844 ntBASIC1.9□□□□□ -2.11
TPM3P06753 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.9□□□□□ -2.11
TPM3P06753 AC007490.1-201ENST00000624321 703 ntBASIC1.9□□□□□ -2.11
TPM3P06753 IGHVIII-44-202ENST00000636235 289 ntBASIC1.9□□□□□ -2.11
TPM3P06753 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.89□□□□□ -2.11
TPM3P06753 RNU6-778P-201ENST00000363269 103 ntBASIC1.89□□□□□ -2.11
TPM3P06753 U8.3-201ENST00000363321 132 ntBASIC1.89□□□□□ -2.11
TPM3P06753 RNA5SP88-201ENST00000365560 109 ntBASIC1.89□□□□□ -2.11
TPM3P06753 RNU1-39P-201ENST00000383897 165 ntBASIC1.89□□□□□ -2.11
TPM3P06753 CCNG1P1-201ENST00000406783 885 ntBASIC1.89□□□□□ -2.11
TPM3P06753 POLHP1-201ENST00000411806 470 ntBASIC1.89□□□□□ -2.11
TPM3P06753 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM3P06753 SNRPEP9-201ENST00000436794 238 ntBASIC1.89□□□□□ -2.11
TPM3P06753 AC027575.1-201ENST00000481064 460 ntBASIC1.89□□□□□ -2.11
TPM3P06753 TMEM251P1-201ENST00000503717 318 ntBASIC1.89□□□□□ -2.11
TPM3P06753 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM3P06753 AC096745.1-201ENST00000509945 370 ntBASIC1.89□□□□□ -2.11
TPM3P06753 RNA5SP112-201ENST00000515937 99 ntBASIC1.89□□□□□ -2.11
TPM3P06753 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
TPM3P06753 RNU6-1102P-201ENST00000516149 96 ntBASIC1.89□□□□□ -2.11
TPM3P06753 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM3P06753 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.89□□□□□ -2.11
TPM3P06753 AC022861.1-201ENST00000522981 663 ntBASIC1.89□□□□□ -2.11
TPM3P06753 AC006518.2-201ENST00000542513 940 ntBASIC1.89□□□□□ -2.11
TPM3P06753 MTCYBP23-201ENST00000558717 1102 ntBASIC1.89□□□□□ -2.11
TPM3P06753 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM3P06753 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
TPM3P06753 AC009233.1-201ENST00000616477 371 ntBASIC1.89□□□□□ -2.11
TPM3P06753 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.89□□□□□ -2.11
TPM3P06753 MKKS-204ENST00000639674 192 ntBASIC1.89□□□□□ -2.11
TPM3P06753 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TPM3P06753 MIR16-2-201ENST00000362117 81 ntBASIC1.88□□□□□ -2.11
TPM3P06753 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.88□□□□□ -2.11
TPM3P06753 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TPM3P06753 AL356421.1-201ENST00000403255 413 ntBASIC1.88□□□□□ -2.11
TPM3P06753 RPL7P27-201ENST00000403775 720 ntBASIC1.88□□□□□ -2.11
TPM3P06753 MIR1294-201ENST00000408503 142 ntBASIC1.88□□□□□ -2.11
TPM3P06753 TPMTP3-201ENST00000411928 735 ntBASIC1.88□□□□□ -2.11
TPM3P06753 RPS24P7-201ENST00000416921 246 ntBASIC1.88□□□□□ -2.11
TPM3P06753 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM3P06753 AL512661.1-201ENST00000434586 1253 ntBASIC1.88□□□□□ -2.11
TPM3P06753 FAM103A2P-201ENST00000444122 354 ntBASIC1.88□□□□□ -2.11
TPM3P06753 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM3P06753 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM3P06753 AL160314.1-201ENST00000490836 438 ntBASIC1.88□□□□□ -2.11
TPM3P06753 RNU6-970P-201ENST00000516312 107 ntBASIC1.88□□□□□ -2.11
TPM3P06753 RNU6-1261P-201ENST00000517194 104 ntBASIC1.88□□□□□ -2.11
TPM3P06753 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.88□□□□□ -2.11
TPM3P06753 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.88□□□□□ -2.11
TPM3P06753 AC124283.4-201ENST00000581815 456 ntBASIC1.88□□□□□ -2.11
TPM3P06753 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.88□□□□□ -2.11
TPM3P06753 AL773524.1-201ENST00000614065 229 ntBASIC1.88□□□□□ -2.11
TPM3P06753 MTND5P29-201ENST00000458676 1807 ntBASIC1.88□□□□□ -2.11
TPM3P06753 AC104454.1-201ENST00000421341 1401 ntBASIC1.88□□□□□ -2.11
TPM3P06753 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM3P06753 AL138713.1-201ENST00000624026 2130 ntBASIC1.87□□□□□ -2.11
TPM3P06753 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TPM3P06753 SNRPEP3-201ENST00000338402 276 ntBASIC1.87□□□□□ -2.11
TPM3P06753 RNU4-82P-201ENST00000362443 140 ntBASIC1.87□□□□□ -2.11
TPM3P06753 RNU6-748P-201ENST00000384648 107 ntBASIC1.87□□□□□ -2.11
TPM3P06753 DHFRP6-201ENST00000401776 268 ntBASIC1.87□□□□□ -2.11
TPM3P06753 PTGES3P2-201ENST00000407942 482 ntBASIC1.87□□□□□ -2.11
TPM3P06753 RNU2-63P-201ENST00000410792 194 ntBASIC1.87□□□□□ -2.11
TPM3P06753 VN1R36P-201ENST00000414936 291 ntBASIC1.87□□□□□ -2.11
TPM3P06753 AC027644.1-201ENST00000419595 298 ntBASIC1.87□□□□□ -2.11
TPM3P06753 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM3P06753 AL645568.3-201ENST00000433683 316 ntBASIC1.87□□□□□ -2.11
TPM3P06753 AC092427.1-201ENST00000439177 601 ntBASIC1.87□□□□□ -2.11
TPM3P06753 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.87□□□□□ -2.11
TPM3P06753 MOB1AP2-201ENST00000446060 614 ntBASIC1.87□□□□□ -2.11
TPM3P06753 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
TPM3P06753 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM3P06753 AC023632.1-201ENST00000518463 375 ntBASIC1.87□□□□□ -2.11
TPM3P06753 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM3P06753 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM3P06753 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.87□□□□□ -2.11
TPM3P06753 AL390208.1-201ENST00000605885 644 ntBASIC1.87□□□□□ -2.11
TPM3P06753 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM3P06753 AC110994.2-201ENST00000635481 492 ntBASIC1.87□□□□□ -2.11
TPM3P06753 MIR1322-201ENST00000638013 71 ntBASIC1.87□□□□□ -2.11
TPM3P06753 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
TPM3P06753 RNU6-28P-201ENST00000362378 107 ntBASIC1.86□□□□□ -2.11
TPM3P06753 Y_RNA.25-201ENST00000362528 102 ntBASIC1.86□□□□□ -2.11
TPM3P06753 NDUFS5P1-201ENST00000405668 289 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms