Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFAP04085 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 AC136601.2-201ENST00000604356 474 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC098479.1-201ENST00000609225 154 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC244107.2-201ENST00000611773 76 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 OR51H2P-202ENST00000641424 3046 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFAP04085 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFAP04085 LINC01109-201ENST00000603837 3081 ntBASIC4.73□□□□□ -1.65
PDGFAP04085 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
PDGFAP04085 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDGFAP04085 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFAP04085 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 AL360270.2-201ENST00000562952 5985 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC006206.1-201ENST00000544842 3387 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 MIR335-201ENST00000362173 94 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 RNA5SP191-201ENST00000362585 102 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 RNY3P4-201ENST00000384428 101 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFAP04085 AL590135.1-201ENST00000422215 156 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 RPL23AP25-201ENST00000430973 463 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC091286.1-201ENST00000431233 461 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 AC006026.2-201ENST00000457376 180 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFAP04085 RN7SL385P-201ENST00000468873 276 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFAP04085 AC091912.1-201ENST00000511351 248 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC010265.1-201ENST00000513509 211 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 RNA5SP43-201ENST00000516559 110 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFAP04085 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 MIR6780A-201ENST00000615089 68 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 U6.92-201ENST00000636464 89 ntBASIC4.72□□□□□ -1.65
PDGFAP04085 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFAP04085 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFAP04085 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PDGFAP04085 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFAP04085 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
PDGFAP04085 AP001148.1-201ENST00000624124 2359 ntBASIC4.71□□□□□ -1.65
PDGFAP04085 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFAP04085 SNORA62-201ENST00000365493 153 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDGFAP04085 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDGFAP04085 AP000275.1-201ENST00000411943 390 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 AC104333.2-201ENST00000422630 192 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 RPS6P12-201ENST00000432491 726 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 RPS17P8-201ENST00000434525 335 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFAP04085 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFAP04085 AC098869.1-201ENST00000481627 292 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 RN7SL244P-201ENST00000493405 297 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 AC010469.2-201ENST00000496412 480 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 ANXA2P1-201ENST00000505539 926 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 RNU6-138P-201ENST00000515952 107 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 RN7SKP92-201ENST00000517266 244 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 CASP1P1-201ENST00000526345 212 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFAP04085 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFAP04085 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFAP04085 AP001282.2-201ENST00000616149 309 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 MIR376A1-201ENST00000616574 68 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 AC112200.1-201ENST00000625015 234 ntBASIC4.71□□□□□ -1.66
PDGFAP04085 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFAP04085 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFAP04085 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFAP04085 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFAP04085 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFAP04085 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFAP04085 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFAP04085 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFAP04085 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFAP04085 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFAP04085 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFAP04085 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PDGFAP04085 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFAP04085 MARK2P15-201ENST00000432204 2186 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms