Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU4-29P-201ENST00000515943 174 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 RNU6-927P-201ENST00000516199 100 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 RNA5SP290-201ENST00000517133 127 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AC021269.2-201ENST00000532318 330 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 MTCO2P15-201ENST00000532655 656 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 DPPA3P3-201ENST00000603842 430 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC004805.2-201ENST00000605382 482 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC022306.3-201ENST00000619930 550 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AP000484.1-201ENST00000620067 1252 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AL031601.2-202ENST00000622650 282 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AP003485.2-201ENST00000623636 610 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AC097655.1-201ENST00000635075 318 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AL365361.1-201ENST00000566942 3481 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND4P03905 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MT-ND4P03905 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MT-ND4P03905 RNU6-433P-201ENST00000363216 104 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
MT-ND4P03905 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND4P03905 AL591416.1-201ENST00000404015 867 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AL139397.2-201ENST00000404529 772 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 RNU6-757P-201ENST00000410334 100 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 RNU6-1328P-201ENST00000410938 106 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.94□□□□□ -2.1
MT-ND4P03905 SKA2P1-201ENST00000425592 390 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND4P03905 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.94□□□□□ -2.1
MT-ND4P03905 CECR9-201ENST00000453421 199 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.94□□□□□ -2.1
MT-ND4P03905 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 RPS27AP10-201ENST00000496103 208 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
MT-ND4P03905 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
MT-ND4P03905 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND4P03905 RNA5SP216-201ENST00000516111 123 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.94□□□□□ -2.1
MT-ND4P03905 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 TMF1P1-201ENST00000576058 373 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND4P03905 AC103810.6-201ENST00000606708 136 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC097468.3-201ENST00000607956 456 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC007038.2-201ENST00000608095 740 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC046143.2-201ENST00000609789 160 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC097478.2-201ENST00000610572 514 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AC013562.2-201ENST00000611632 603 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.94□□□□□ -2.1
MT-ND4P03905 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 MIR6766-201ENST00000622641 72 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AL356596.1-201ENST00000624230 379 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.94□□□□□ -2.1
MT-ND4P03905 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND4P03905 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND4P03905 MTND4P1-201ENST00000457501 1466 ntBASIC1.94□□□□□ -2.1
MT-ND4P03905 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND4P03905 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND4P03905 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
MT-ND4P03905 RNU6-723P-201ENST00000383973 107 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC119751.3-201ENST00000399720 670 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.93□□□□□ -2.1
MT-ND4P03905 BPY2DP-201ENST00000422208 265 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 ELOCP14-201ENST00000428070 331 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 SRIP2-201ENST00000428470 166 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC244035.1-201ENST00000430042 390 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 MTND1P28-201ENST00000435623 950 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.93□□□□□ -2.1
MT-ND4P03905 ELOCP7-201ENST00000439968 331 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND4P03905 ELOCP30-201ENST00000447108 299 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
MT-ND4P03905 MTATP6P7-201ENST00000453315 681 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.93□□□□□ -2.1
MT-ND4P03905 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.93□□□□□ -2.1
MT-ND4P03905 AC013267.1-201ENST00000458227 267 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC004263.1-201ENST00000479327 332 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.93□□□□□ -2.1
MT-ND4P03905 AC234781.5-201ENST00000508429 271 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC098591.2-201ENST00000510152 315 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 MTATP6P9-201ENST00000515039 680 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 RNA5SP24-201ENST00000516478 95 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.93□□□□□ -2.1
MT-ND4P03905 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms