Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC091834.1-201ENST00000614543 472 ntBASIC1.83□□□□□ -2.12
APOEP02649 OR1S1-201ENST00000624470 978 ntBASIC1.83□□□□□ -2.12
APOEP02649 MIR7157-201ENST00000635801 60 ntBASIC1.83□□□□□ -2.12
APOEP02649 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
APOEP02649 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.82□□□□□ -2.12
APOEP02649 RNU6-549P-201ENST00000384433 107 ntBASIC1.82□□□□□ -2.12
APOEP02649 UBE2V1P15-201ENST00000407776 448 ntBASIC1.82□□□□□ -2.12
APOEP02649 LUZP4P1-201ENST00000415420 344 ntBASIC1.82□□□□□ -2.12
APOEP02649 RPL23AP39-201ENST00000415533 405 ntBASIC1.82□□□□□ -2.12
APOEP02649 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.82□□□□□ -2.12
APOEP02649 PGBD4P6-201ENST00000421501 610 ntBASIC1.82□□□□□ -2.12
APOEP02649 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.82□□□□□ -2.12
APOEP02649 AC002381.1-201ENST00000447049 280 ntBASIC1.82□□□□□ -2.12
APOEP02649 RPL39P6-201ENST00000448289 150 ntBASIC1.82□□□□□ -2.12
APOEP02649 RPS20P20-201ENST00000460498 340 ntBASIC1.82□□□□□ -2.12
APOEP02649 FAM92A1P2-202ENST00000504766 877 ntBASIC1.82□□□□□ -2.12
APOEP02649 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
APOEP02649 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.82□□□□□ -2.12
APOEP02649 AL133241.1-201ENST00000556832 487 ntBASIC1.82□□□□□ -2.12
APOEP02649 AC104763.2-201ENST00000604179 382 ntBASIC1.82□□□□□ -2.12
APOEP02649 AL596245.1-201ENST00000618994 362 ntBASIC1.82□□□□□ -2.12
APOEP02649 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
APOEP02649 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
APOEP02649 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
APOEP02649 U6.112-201ENST00000384129 70 ntBASIC1.81□□□□□ -2.12
APOEP02649 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOEP02649 RN7SKP158-201ENST00000410453 326 ntBASIC1.81□□□□□ -2.12
APOEP02649 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 AL645568.3-201ENST00000433683 316 ntBASIC1.81□□□□□ -2.12
APOEP02649 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.81□□□□□ -2.12
APOEP02649 AC092393.1-201ENST00000439625 742 ntBASIC1.81□□□□□ -2.12
APOEP02649 AC093155.1-201ENST00000440164 826 ntBASIC1.81□□□□□ -2.12
APOEP02649 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 snoU13.23-201ENST00000458863 104 ntBASIC1.81□□□□□ -2.12
APOEP02649 AC008481.1-201ENST00000463278 396 ntBASIC1.81□□□□□ -2.12
APOEP02649 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
APOEP02649 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.81□□□□□ -2.12
APOEP02649 RPS27AP10-201ENST00000496103 208 ntBASIC1.81□□□□□ -2.12
APOEP02649 TMEM251P1-201ENST00000503717 318 ntBASIC1.81□□□□□ -2.12
APOEP02649 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.81□□□□□ -2.12
APOEP02649 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
APOEP02649 NRON-201ENST00000517270 370 ntBASIC1.81□□□□□ -2.12
APOEP02649 AC022784.5-201ENST00000522241 437 ntBASIC1.81□□□□□ -2.12
APOEP02649 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.81□□□□□ -2.12
APOEP02649 CYCSP2-201ENST00000558168 301 ntBASIC1.81□□□□□ -2.12
APOEP02649 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.81□□□□□ -2.12
APOEP02649 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.81□□□□□ -2.12
APOEP02649 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.81□□□□□ -2.12
APOEP02649 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
APOEP02649 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.81□□□□□ -2.12
APOEP02649 AC020658.4-201ENST00000613987 684 ntBASIC1.81□□□□□ -2.12
APOEP02649 Z98749.2-208ENST00000381646 500 ntBASIC1.8□□□□□ -2.12
APOEP02649 RNU6-1300P-201ENST00000391046 108 ntBASIC1.8□□□□□ -2.12
APOEP02649 DHFRP6-201ENST00000401776 268 ntBASIC1.8□□□□□ -2.12
APOEP02649 IFNA20P-201ENST00000436840 528 ntBASIC1.8□□□□□ -2.12
APOEP02649 USP9YP15-201ENST00000442391 422 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.8□□□□□ -2.12
APOEP02649 AL500527.1-201ENST00000448532 255 ntBASIC1.8□□□□□ -2.12
APOEP02649 RNU6-775P-201ENST00000459318 96 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC080013.2-201ENST00000460866 323 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC025181.1-201ENST00000477507 416 ntBASIC1.8□□□□□ -2.12
APOEP02649 HMGB1P36-201ENST00000487709 576 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.8□□□□□ -2.12
APOEP02649 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.8□□□□□ -2.12
APOEP02649 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
APOEP02649 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.8□□□□□ -2.12
APOEP02649 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
APOEP02649 RNU6-840P-201ENST00000517275 65 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC118273.2-201ENST00000532092 465 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.8□□□□□ -2.12
APOEP02649 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.8□□□□□ -2.12
APOEP02649 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.8□□□□□ -2.12
APOEP02649 AC010928.2-201ENST00000588017 287 ntBASIC1.8□□□□□ -2.12
APOEP02649 AL391813.1-201ENST00000603098 260 ntBASIC1.8□□□□□ -2.12
APOEP02649 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.8□□□□□ -2.12
APOEP02649 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
APOEP02649 AC007490.1-201ENST00000624321 703 ntBASIC1.8□□□□□ -2.12
APOEP02649 AL159972.1-201ENST00000625150 448 ntBASIC1.8□□□□□ -2.12
APOEP02649 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.8□□□□□ -2.12
APOEP02649 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
APOEP02649 MIR764-201ENST00000390811 85 ntBASIC1.79□□□□□ -2.12
APOEP02649 AL627390.1-201ENST00000396055 340 ntBASIC1.79□□□□□ -2.12
APOEP02649 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.79□□□□□ -2.12
APOEP02649 AL139421.1-201ENST00000423010 169 ntBASIC1.79□□□□□ -2.12
APOEP02649 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
APOEP02649 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.79□□□□□ -2.12
APOEP02649 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.79□□□□□ -2.12
APOEP02649 PPP1R2P5-201ENST00000457256 603 ntBASIC1.79□□□□□ -2.12
APOEP02649 RPS20P22-201ENST00000473700 357 ntBASIC1.79□□□□□ -2.12
APOEP02649 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.79□□□□□ -2.12
APOEP02649 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.79□□□□□ -2.12
APOEP02649 AC023632.1-201ENST00000518463 375 ntBASIC1.79□□□□□ -2.12
APOEP02649 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.79□□□□□ -2.12
APOEP02649 AC125611.1-201ENST00000549563 229 ntBASIC1.79□□□□□ -2.12
APOEP02649 AC007151.1-201ENST00000572774 483 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms