Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.51□□□□□ -2.17
COL1A1P02452 MTCO1P40-201ENST00000574371 625 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 AC022387.2-201ENST00000604050 448 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 AC073413.2-201ENST00000604332 360 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 SNORD14A-201ENST00000606526 91 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 AC135507.1-201ENST00000607214 561 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 DEFB108F-201ENST00000344638 222 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RNU6-37P-201ENST00000362692 107 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RNU6-11P-201ENST00000364234 107 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RNU6-444P-201ENST00000383988 108 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RNU6-1032P-201ENST00000384100 107 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 MIR649-201ENST00000384843 97 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL1A1P02452 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 AL022400.1-201ENST00000423946 935 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC005534.2-201ENST00000431047 433 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 MTCO1P57-201ENST00000432182 261 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 FGF7P5-201ENST00000441829 291 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RNA5SP233-201ENST00000459153 113 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 COL6A4P2-205ENST00000509855 506 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RNU6-928P-201ENST00000516876 104 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AP005902.1-201ENST00000521358 186 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC090821.2-201ENST00000523552 176 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 DEFB108D-201ENST00000527787 222 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.5□□□□□ -2.17
COL1A1P02452 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL1A1P02452 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 RN7SL793P-201ENST00000583259 296 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC021749.1-201ENST00000604322 607 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AL450336.1-201ENST00000605180 586 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AP001486.3-201ENST00000615334 372 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC024595.1-201ENST00000623088 387 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 CCT4P2-201ENST00000233836 1548 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 MTND5P31-201ENST00000419366 1374 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 ICE2P2-201ENST00000483823 2787 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.5□□□□□ -2.17
COL1A1P02452 RNU6-270P-201ENST00000364131 105 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 Z86062.1-201ENST00000406773 777 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 RPS3AP24-201ENST00000407896 734 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC012497.1-201ENST00000429392 575 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 RAB11AP1-201ENST00000442978 646 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.5□□□□□ -2.17
COL1A1P02452 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.5□□□□□ -2.17
COL1A1P02452 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 EEF1B2P4-201ENST00000551398 348 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC027104.1-201ENST00000563702 681 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC074051.3-201ENST00000570238 358 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 MIR3921-201ENST00000577308 85 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 MIR5571-201ENST00000577998 113 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.5□□□□□ -2.17
COL1A1P02452 AP000254.1-201ENST00000609934 520 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 ZNF663P-202ENST00000641770 1131 ntBASIC1.5□□□□□ -2.17
COL1A1P02452 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
COL1A1P02452 RNU6-1035P-201ENST00000384477 107 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 AL033519.2-201ENST00000403958 392 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 AL035410.1-201ENST00000427409 427 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.49□□□□□ -2.17
COL1A1P02452 MTATP6P7-201ENST00000453315 681 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.49□□□□□ -2.17
COL1A1P02452 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.49□□□□□ -2.17
COL1A1P02452 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.49□□□□□ -2.17
COL1A1P02452 AC024619.4-201ENST00000580924 316 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.49□□□□□ -2.17
COL1A1P02452 AC079610.2-201ENST00000604818 690 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 AC010738.1-201ENST00000604970 987 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.49□□□□□ -2.17
COL1A1P02452 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
COL1A1P02452 CIR1P3-201ENST00000405137 479 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.48□□□□□ -2.17
COL1A1P02452 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.48□□□□□ -2.17
COL1A1P02452 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL1A1P02452 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.48□□□□□ -2.17
COL1A1P02452 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.48□□□□□ -2.17
COL1A1P02452 MTND1P18-201ENST00000448191 573 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.48□□□□□ -2.17
COL1A1P02452 AL583843.1-201ENST00000456070 346 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 AC015724.1-201ENST00000478577 156 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.48□□□□□ -2.17
COL1A1P02452 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.48□□□□□ -2.17
COL1A1P02452 RNA5SP476-201ENST00000516613 103 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 RNU7-193P-201ENST00000516723 65 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 RNU6-1282P-201ENST00000516735 96 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.48□□□□□ -2.17
COL1A1P02452 AC016727.2-201ENST00000603988 621 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 AC242628.1-201ENST00000606810 391 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 AC093838.1-201ENST00000613014 469 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.48□□□□□ -2.17
COL1A1P02452 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL1A1P02452 AC080100.1-201ENST00000624239 5356 ntBASIC1.48□□□□□ -2.17
COL1A1P02452 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.47□□□□□ -2.17
COL1A1P02452 Y_RNA.68-201ENST00000362881 102 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 RNY1P4-201ENST00000384595 115 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 MIR222-201ENST00000384992 110 ntBASIC1.47□□□□□ -2.17
COL1A1P02452 RNU1-139P-201ENST00000391307 165 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms