Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 BMI1P1-201ENST00000445879 941 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4O95639 PAXBP1P1-201ENST00000449315 447 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.74□□□□□ -2.13
CPSF4O95639 HSFY5P-201ENST00000453726 309 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AC092798.1-201ENST00000458542 409 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 RPL7P18-201ENST00000478965 734 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4O95639 RPS27P26-201ENST00000494583 239 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AC093281.2-201ENST00000510153 597 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 NRON-201ENST00000517270 370 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4O95639 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.74□□□□□ -2.13
CPSF4O95639 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4O95639 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4O95639 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4O95639 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4O95639 UBE2L4-201ENST00000587688 464 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 RPP40P2-201ENST00000603596 712 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL596327.1-201ENST00000603629 213 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.74□□□□□ -2.13
CPSF4O95639 AL139344.1-201ENST00000605228 195 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL133445.2-201ENST00000611191 527 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4O95639 AC013476.2-201ENST00000614456 459 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL158801.5-201ENST00000623123 465 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4O95639 MIR4275-201ENST00000636486 87 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 DDX10P1-201ENST00000448545 1933 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 RNU6-853P-201ENST00000364306 107 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 RNU6-906P-201ENST00000384700 70 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 RNA5SP354-201ENST00000391247 136 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AL079342.1-201ENST00000401460 267 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AL109755.1-201ENST00000401791 649 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 MIR320C1-201ENST00000408566 88 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.73□□□□□ -2.13
CPSF4O95639 RNU6-193P-201ENST00000410977 107 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 MTND1P21-201ENST00000412991 285 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 AC092047.1-201ENST00000424997 240 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AC007919.1-201ENST00000429380 217 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 UBE2V1P13-201ENST00000436983 439 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 Z82210.1-201ENST00000440037 231 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 MTND3P1-201ENST00000441336 220 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 PIGFP3-201ENST00000441918 722 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AP000542.1-201ENST00000448473 371 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 FABP5P13-201ENST00000452144 328 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 UBE2DNL-203ENST00000474922 222 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AC007182.2-201ENST00000489251 402 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AC022447.3-201ENST00000506865 495 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 HMGB3P3-201ENST00000510526 400 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4O95639 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.73□□□□□ -2.13
CPSF4O95639 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CPSF4O95639 TRAV28-201ENST00000557548 323 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4O95639 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 AC135628.1-201ENST00000568867 534 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4O95639 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.73□□□□□ -2.13
CPSF4O95639 TUG1_2.1-201ENST00000614234 87 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4O95639 UCA1.1-201ENST00000620952 75 ntBASIC1.73□□□□□ -2.13
CPSF4O95639 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CPSF4O95639 RNA5SP88-201ENST00000365560 109 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4O95639 RNU6-741P-201ENST00000383889 107 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 U3.20-201ENST00000390909 217 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AL590084.2-201ENST00000401481 382 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 MTCO2P8-201ENST00000412213 658 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.72□□□□□ -2.13
CPSF4O95639 ELOCP9-201ENST00000418624 239 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4O95639 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4O95639 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.72□□□□□ -2.13
CPSF4O95639 TXNL1P1-201ENST00000429528 554 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AL049734.2-201ENST00000441066 616 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 FGF7P5-201ENST00000441829 291 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 WASF1P1-201ENST00000447560 1131 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CPSF4O95639 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4O95639 AP1S2P1-201ENST00000457344 379 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 MTND4LP3-201ENST00000468320 276 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
CPSF4O95639 MTCYBP43-201ENST00000513621 740 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4O95639 AC023538.1-201ENST00000534576 736 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4O95639 MIR4658-201ENST00000584344 65 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.72□□□□□ -2.13
CPSF4O95639 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.72□□□□□ -2.13
CPSF4O95639 AL357094.1-201ENST00000603845 844 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AL158042.1-201ENST00000605338 460 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms