Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL139039.1-201ENST00000401900 692 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 RPL7AP73-201ENST00000413490 353 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.07□□□□□ -1.76
CNOT4O95628 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.07□□□□□ -1.76
CNOT4O95628 AL591704.1-201ENST00000432574 275 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.07□□□□□ -1.76
CNOT4O95628 RPS26P2-201ENST00000440331 348 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AL359672.1-201ENST00000442302 409 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 ISCUP1-201ENST00000454451 448 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CNOT4O95628 RN7SL41P-201ENST00000476144 297 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AF213884.1-201ENST00000488102 463 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 SLC25A15P5-201ENST00000508033 253 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CNOT4O95628 AC096745.1-201ENST00000509945 370 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 RNU6-307P-201ENST00000516743 106 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNOT4O95628 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.07□□□□□ -1.76
CNOT4O95628 AC011494.1-201ENST00000596454 237 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AC174048.1-201ENST00000603389 144 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AC092447.9-201ENST00000603395 144 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.07□□□□□ -1.76
CNOT4O95628 AL161423.1-201ENST00000613700 262 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 MIR6130-201ENST00000619419 109 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 AP005019.3-201ENST00000620418 560 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CNOT4O95628 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNOT4O95628 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.07□□□□□ -1.76
CNOT4O95628 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.07□□□□□ -1.76
CNOT4O95628 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNOT4O95628 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 AL672167.1-203ENST00000641299 2975 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.06□□□□□ -1.76
CNOT4O95628 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CNOT4O95628 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.06□□□□□ -1.76
CNOT4O95628 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 RNU6-214P-201ENST00000384130 107 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AL592291.1-201ENST00000403830 352 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 RNU6-293P-201ENST00000411259 106 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.06□□□□□ -1.76
CNOT4O95628 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 SNORA71B-202ENST00000439232 272 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 RPS11P1-201ENST00000451072 473 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AC108860.1-201ENST00000484521 383 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 AC026402.1-201ENST00000513642 170 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AC015795.1-201ENST00000513669 327 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 Y_RNA.668-201ENST00000516233 93 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 Y_RNA.689-201ENST00000516589 107 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 RNA5SP384-201ENST00000516615 116 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AP005902.1-201ENST00000521358 186 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.06□□□□□ -1.76
CNOT4O95628 MED28P6-201ENST00000558776 231 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.06□□□□□ -1.76
CNOT4O95628 AC023575.1-201ENST00000580510 358 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CNOT4O95628 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 MIR6716-201ENST00000613413 80 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 AL450472.3-201ENST00000615578 367 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.06□□□□□ -1.76
CNOT4O95628 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
CNOT4O95628 AP001486.2-201ENST00000561652 5113 ntBASIC4.06□□□□□ -1.76
CNOT4O95628 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.06□□□□□ -1.76
CNOT4O95628 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNOT4O95628 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.05□□□□□ -1.76
CNOT4O95628 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.05□□□□□ -1.76
CNOT4O95628 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNOT4O95628 HSPA8P4-201ENST00000511877 1920 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNOT4O95628 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
CNOT4O95628 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNOT4O95628 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNOT4O95628 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNOT4O95628 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNOT4O95628 Y_RNA.2-201ENST00000362330 96 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 RNA5SP388-201ENST00000362584 119 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 RNU6-1109P-201ENST00000391187 107 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 MIR921-201ENST00000401133 56 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 RPS4XP7-201ENST00000406274 780 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 RNU6-101P-201ENST00000410323 104 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 AC243428.1-201ENST00000421099 264 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.05□□□□□ -1.76
CNOT4O95628 USP9YP30-201ENST00000430729 455 ntBASIC4.05□□□□□ -1.76
CNOT4O95628 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms