Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR4703-201ENST00000577728 79 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC006270.2-201ENST00000578523 652 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 MIR4424-201ENST00000585257 86 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC006329.2-201ENST00000611491 394 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 AL365440.1-201ENST00000436135 2167 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC032011.1-201ENST00000611703 1549 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.04□□□□□ -1.76
CDKL5O76039 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CDKL5O76039 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDKL5O76039 AC058791.1-201ENST00000608412 3198 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 MTND5P3-201ENST00000438536 1800 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AL513302.2-201ENST00000562313 1842 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC244517.1-201ENST00000606030 2086 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CDKL5O76039 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDKL5O76039 Y_RNA.100-201ENST00000363141 102 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 Y_RNA.373-201ENST00000365600 103 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 Y_RNA.384-201ENST00000383909 102 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AL136372.1-201ENST00000403060 228 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 RN7SKP111-201ENST00000410349 271 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 RNU2-47P-201ENST00000410649 186 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 RPS7P15-201ENST00000415804 584 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 BTF3L4P3-201ENST00000418879 476 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AP000907.1-201ENST00000428428 510 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.03□□□□□ -1.76
CDKL5O76039 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDKL5O76039 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.03□□□□□ -1.76
CDKL5O76039 U3.44-201ENST00000458938 192 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 RNU7-180P-201ENST00000459240 63 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 SNORD19B-201ENST00000459623 84 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC004801.2-202ENST00000463559 283 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC106707.2-201ENST00000484182 374 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC096576.1-201ENST00000489014 359 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.03□□□□□ -1.76
CDKL5O76039 HIGD1AP3-201ENST00000515857 278 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 RNA5SP503-201ENST00000517047 117 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC107934.2-201ENST00000518653 310 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 FAM60DP-201ENST00000524174 632 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 SETP7-201ENST00000552169 453 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC020661.2-201ENST00000560114 134 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 ZNF192P1-203ENST00000565888 810 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 MIR5583-1-201ENST00000580941 59 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 MIR4293-201ENST00000584305 78 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.03□□□□□ -1.76
CDKL5O76039 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.03□□□□□ -1.76
CDKL5O76039 AC009093.8-201ENST00000641769 292 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 AC005183.1-201ENST00000603687 1979 ntBASIC4.03□□□□□ -1.76
CDKL5O76039 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDKL5O76039 AL021368.2-201ENST00000606125 5352 ntBASIC4.03□□□□□ -1.77
CDKL5O76039 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDKL5O76039 AC073343.1-201ENST00000328239 651 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 RNU6-989P-201ENST00000362756 107 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 RNU6-188P-201ENST00000364207 107 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 Y_RNA.387-201ENST00000383918 102 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 SNORA11-201ENST00000408789 128 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 RNA5SP107-201ENST00000411358 122 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.02□□□□□ -1.77
CDKL5O76039 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 MTND2P23-201ENST00000422990 651 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.02□□□□□ -1.77
CDKL5O76039 HMGB3P11-201ENST00000440127 604 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AC005094.1-201ENST00000440420 368 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AL359073.1-201ENST00000448036 403 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.02□□□□□ -1.77
CDKL5O76039 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.02□□□□□ -1.77
CDKL5O76039 RNU6-1038P-201ENST00000516516 104 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 TRMT10BP1-201ENST00000519377 943 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.02□□□□□ -1.77
CDKL5O76039 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
CDKL5O76039 AC093249.1-201ENST00000567049 203 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.02□□□□□ -1.77
CDKL5O76039 AC006130.2-201ENST00000586202 326 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AP001836.1-201ENST00000604675 523 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AL360085.1-201ENST00000604713 532 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 CTHRC1P1-201ENST00000605383 469 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CDKL5O76039 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.02□□□□□ -1.77
CDKL5O76039 CR392039.5-201ENST00000623201 510 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 AC011155.2-201ENST00000623202 216 ntBASIC4.02□□□□□ -1.77
CDKL5O76039 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDKL5O76039 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDKL5O76039 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms