Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.71□□□□□ -1.66
VAMP4O75379 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.71□□□□□ -1.66
VAMP4O75379 AL133547.1-201ENST00000448546 220 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 RPS15AP27-201ENST00000449183 343 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.71□□□□□ -1.66
VAMP4O75379 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.71□□□□□ -1.66
VAMP4O75379 RBBP4P6-201ENST00000508098 202 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 AC026801.2-201ENST00000515352 425 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 APOOP3-201ENST00000536787 586 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 IMMP1LP2-201ENST00000552954 492 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 AC023043.2-201ENST00000589678 1026 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 AL138889.2-201ENST00000603883 242 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 HMGB1P50-201ENST00000605814 607 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.71□□□□□ -1.66
VAMP4O75379 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.71□□□□□ -1.66
VAMP4O75379 MIR4275-201ENST00000636486 87 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 AP000553.6-201ENST00000641242 118 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 MTCO1P12-201ENST00000414273 1543 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VAMP4O75379 AC008725.1-201ENST00000605123 2263 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 Y_RNA.146-201ENST00000363549 102 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 Y_RNA.197-201ENST00000364004 102 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 Y_RNA.399-201ENST00000383955 105 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 SNORA5A-201ENST00000384111 134 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 RNU6-356P-201ENST00000384140 107 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AL360182.1-201ENST00000397433 468 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 MTHFD2P2-201ENST00000407725 247 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 AC099677.1-201ENST00000420575 175 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.7□□□□□ -1.66
VAMP4O75379 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.7□□□□□ -1.66
VAMP4O75379 HIGD1AP13-201ENST00000509878 289 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 RN7SKP24-201ENST00000515888 284 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.7□□□□□ -1.66
VAMP4O75379 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 MIR4790-201ENST00000577799 79 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.7□□□□□ -1.66
VAMP4O75379 MIR3158-1-201ENST00000583596 81 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.7□□□□□ -1.66
VAMP4O75379 AC012669.1-201ENST00000603209 283 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AC012409.4-201ENST00000612923 249 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 AC004696.1-201ENST00000614345 607 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.7□□□□□ -1.66
VAMP4O75379 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAMP4O75379 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAMP4O75379 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.7□□□□□ -1.66
VAMP4O75379 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VAMP4O75379 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAMP4O75379 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VAMP4O75379 AC007823.1-201ENST00000569932 1566 ntBASIC4.7□□□□□ -1.66
VAMP4O75379 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAMP4O75379 NCAPGP1-201ENST00000505112 1814 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAMP4O75379 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.69□□□□□ -1.66
VAMP4O75379 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.69□□□□□ -1.66
VAMP4O75379 AL161912.2-201ENST00000565707 3007 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 RNU6-263P-201ENST00000363811 107 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 SNORD116-11-201ENST00000383882 92 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 Y_RNA.445-201ENST00000384168 102 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 Y_RNA.482-201ENST00000384377 111 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 RNU1-89P-201ENST00000384592 164 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 MIR554-201ENST00000384874 96 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAMP4O75379 RNU4-78P-201ENST00000410940 126 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 ATP5A1P2-201ENST00000412323 255 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.69□□□□□ -1.66
VAMP4O75379 GOT2P5-201ENST00000433995 546 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 USP9YP7-201ENST00000436723 430 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 USP9YP32-201ENST00000452432 430 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 SNORA84-201ENST00000459229 133 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.69□□□□□ -1.66
VAMP4O75379 AC079140.5-201ENST00000507882 310 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 RNA5SP143-201ENST00000516936 115 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 RANP9-201ENST00000519957 271 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.69□□□□□ -1.66
VAMP4O75379 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.69□□□□□ -1.66
VAMP4O75379 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.69□□□□□ -1.66
VAMP4O75379 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.69□□□□□ -1.66
VAMP4O75379 AC012182.1-201ENST00000570133 895 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.69□□□□□ -1.66
VAMP4O75379 MIR5690-201ENST00000583739 73 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AF038458.1-201ENST00000588406 262 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AL670379.10-201ENST00000604330 253 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AL670379.9-201ENST00000605428 253 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AC009570.1-201ENST00000609599 745 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 AL589994.2-201ENST00000621124 579 ntBASIC4.69□□□□□ -1.66
VAMP4O75379 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VAMP4O75379 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VAMP4O75379 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VAMP4O75379 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms