Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.151-201ENST00000363566 112 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 RN7SKP186-201ENST00000365371 303 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 RHOT1P2-201ENST00000366423 333 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 RNU6-1074P-201ENST00000383995 104 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 RNU6-187P-201ENST00000384139 106 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 Y_RNA.477-201ENST00000384352 108 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 MIR517A-201ENST00000385001 87 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCD1O75127 RNU2-38P-201ENST00000410856 79 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD1O75127 AL645568.3-201ENST00000433683 316 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AC073063.1-201ENST00000434352 607 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTCD1O75127 AL590664.1-201ENST00000448065 339 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AC092451.1-201ENST00000480211 153 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AC018437.1-201ENST00000492214 406 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AC108145.1-201ENST00000503770 153 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 MTND3P25-201ENST00000509243 135 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD1O75127 SNRPGP16-201ENST00000533275 226 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AC006064.5-201ENST00000541782 248 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCD1O75127 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCD1O75127 HSPE1P5-201ENST00000561489 272 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 RPL23AP97-201ENST00000568955 471 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 AC005899.2-201ENST00000584353 90 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 RN7SL435P-201ENST00000584418 282 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCD1O75127 AC233263.6-201ENST00000631132 1963 ntBASIC5.41□□□□□ -1.54
PTCD1O75127 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PTCD1O75127 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD1O75127 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCD1O75127 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCD1O75127 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PTCD1O75127 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCD1O75127 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PTCD1O75127 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCD1O75127 AC026523.2-201ENST00000625039 7739 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCD1O75127 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCD1O75127 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 Y_RNA.288-201ENST00000364854 92 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 SNORD96B-201ENST00000386148 79 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 SNORD66.1-201ENST00000391230 76 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCD1O75127 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCD1O75127 NOTCH2P1-201ENST00000443481 624 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 SNORD127-201ENST00000458892 86 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCD1O75127 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCD1O75127 GNAI2P1-201ENST00000541815 315 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 AC091516.1-201ENST00000549191 703 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCD1O75127 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCD1O75127 HNRNPCP4-201ENST00000571636 900 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 SNORD84-203ENST00000584275 78 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 AL353748.2-201ENST00000622148 471 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 AL031601.2-202ENST00000622650 282 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 MIR6500-201ENST00000622700 86 ntBASIC5.4□□□□□ -1.54
PTCD1O75127 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCD1O75127 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCD1O75127 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCD1O75127 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCD1O75127 AC010615.1-201ENST00000594254 1764 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTCD1O75127 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTCD1O75127 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCD1O75127 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PTCD1O75127 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTCD1O75127 Y_RNA.106-201ENST00000363189 100 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 Y_RNA.210-201ENST00000364161 110 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 Y_RNA.222-201ENST00000364264 102 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 SNORA70.4-201ENST00000365509 134 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 RNU6-1329P-201ENST00000365664 107 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 Y_RNA.483-201ENST00000384380 101 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC096664.2-201ENST00000411843 406 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC063979.1-201ENST00000415539 377 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 MTCO3P19-201ENST00000415864 321 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC243428.1-201ENST00000421099 264 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC139712.2-201ENST00000424302 339 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 RPL23AP46-201ENST00000438548 490 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 RPL26P6-201ENST00000440913 438 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.39□□□□□ -1.55
PTCD1O75127 AC116655.1-201ENST00000508324 901 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC025465.3-201ENST00000510570 311 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCD1O75127 AC131281.1-201ENST00000522984 164 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCD1O75127 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCD1O75127 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTCD1O75127 AC109446.1-201ENST00000566172 220 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCD1O75127 MIR548AC-201ENST00000585049 88 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 AC125232.2-201ENST00000592457 143 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 HMGN2P28-201ENST00000606102 262 ntBASIC5.39□□□□□ -1.55
PTCD1O75127 SNORD58B-201ENST00000607313 66 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms