Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC069304.2-201ENST00000605154 435 ntBASIC2.02□□□□□ -2.09
SHOX2O60902 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.02□□□□□ -2.09
SHOX2O60902 MIR8070-201ENST00000616510 88 ntBASIC2.02□□□□□ -2.09
SHOX2O60902 AL357080.1-201ENST00000617394 239 ntBASIC2.02□□□□□ -2.09
SHOX2O60902 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.02□□□□□ -2.09
SHOX2O60902 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.02□□□□□ -2.09
SHOX2O60902 MTND1P37-201ENST00000636562 264 ntBASIC2.02□□□□□ -2.09
SHOX2O60902 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.01□□□□□ -2.09
SHOX2O60902 AC006020.1-201ENST00000420179 1854 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 MTND4P35-201ENST00000604257 1375 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHOX2O60902 Y_RNA.234-201ENST00000364409 97 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 RNU6-637P-201ENST00000384050 107 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 BTF3P8-201ENST00000414577 526 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AL139421.1-201ENST00000423010 169 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AC007919.1-201ENST00000429380 217 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AL356320.1-201ENST00000429616 163 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 USP9YP22-201ENST00000438971 294 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AL353705.4-201ENST00000449661 238 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 RPL12P25-201ENST00000455592 494 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AC097493.1-201ENST00000463958 372 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.01□□□□□ -2.09
SHOX2O60902 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHOX2O60902 RANP3-201ENST00000530970 276 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 SLC2A13P1-201ENST00000531560 322 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.01□□□□□ -2.09
SHOX2O60902 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHOX2O60902 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.01□□□□□ -2.09
SHOX2O60902 MIR3122-201ENST00000577243 73 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 MIR5708-201ENST00000579723 85 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.01□□□□□ -2.09
SHOX2O60902 NRBF2P1-201ENST00000587407 859 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AL445435.1-201ENST00000604232 665 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AC021749.1-201ENST00000604322 607 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AC069545.1-201ENST00000605671 358 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AC012640.5-201ENST00000623897 319 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 AC006927.2-201ENST00000639256 389 ntBASIC2.01□□□□□ -2.09
SHOX2O60902 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.01□□□□□ -2.09
SHOX2O60902 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHOX2O60902 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2□□□□□ -2.09
SHOX2O60902 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
SHOX2O60902 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2□□□□□ -2.09
SHOX2O60902 RNY1P10-201ENST00000363268 113 ntBASIC2□□□□□ -2.09
SHOX2O60902 RNU6-1078P-201ENST00000364522 103 ntBASIC2□□□□□ -2.09
SHOX2O60902 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2□□□□□ -2.09
SHOX2O60902 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
SHOX2O60902 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2□□□□□ -2.09
SHOX2O60902 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2□□□□□ -2.09
SHOX2O60902 ANKRD26P4-201ENST00000455755 950 ntBASIC2□□□□□ -2.09
SHOX2O60902 PPP1R2P5-201ENST00000457256 603 ntBASIC2□□□□□ -2.09
SHOX2O60902 RPS29P20-201ENST00000489592 171 ntBASIC2□□□□□ -2.09
SHOX2O60902 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2□□□□□ -2.09
SHOX2O60902 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2□□□□□ -2.09
SHOX2O60902 AC023141.11-201ENST00000508864 202 ntBASIC2□□□□□ -2.09
SHOX2O60902 MTCYBP16-201ENST00000509187 1129 ntBASIC2□□□□□ -2.09
SHOX2O60902 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2□□□□□ -2.09
SHOX2O60902 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2□□□□□ -2.09
SHOX2O60902 AC023043.2-201ENST00000589678 1026 ntBASIC2□□□□□ -2.09
SHOX2O60902 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2□□□□□ -2.09
SHOX2O60902 OR1S1-201ENST00000624470 978 ntBASIC2□□□□□ -2.09
SHOX2O60902 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHOX2O60902 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SHOX2O60902 RNA5SP325-201ENST00000363756 130 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.99□□□□□ -2.09
SHOX2O60902 RNU6-1122P-201ENST00000384449 107 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SHOX2O60902 RNU6-220P-201ENST00000390919 107 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 AL139156.1-201ENST00000412785 841 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 TPMTP2-201ENST00000414372 726 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.99□□□□□ -2.09
SHOX2O60902 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.99□□□□□ -2.09
SHOX2O60902 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.99□□□□□ -2.09
SHOX2O60902 MICF-203ENST00000432679 129 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 GTF2IP7-202ENST00000436677 309 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 FAM103A2P-201ENST00000444122 354 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.99□□□□□ -2.09
SHOX2O60902 ATG12P2-201ENST00000456830 416 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.99□□□□□ -2.09
SHOX2O60902 SNORA31.23-201ENST00000517219 133 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 NRON-201ENST00000517270 370 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 FAM92A1P1-201ENST00000528023 890 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 AP003049.1-201ENST00000529418 457 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SHOX2O60902 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.99□□□□□ -2.09
SHOX2O60902 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHOX2O60902 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 AC002545.1-201ENST00000592511 181 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SHOX2O60902 AC068057.2-201ENST00000624047 895 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 MIR7157-201ENST00000635801 60 ntBASIC1.99□□□□□ -2.09
SHOX2O60902 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
SHOX2O60902 RNU5B-4P-201ENST00000363508 111 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SHOX2O60902 RNU2-49P-201ENST00000410666 184 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 RNU2-42P-201ENST00000410697 113 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.98□□□□□ -2.09
SHOX2O60902 GPM6BP3-201ENST00000442797 145 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 MTCYBP42-201ENST00000444653 1130 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms