Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ZNF826P-207ENST00000622273 1910 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CACNA1FO60840 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1FO60840 RNU6-797P-201ENST00000363101 109 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1FO60840 Y_RNA.582-201ENST00000391023 95 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 RNU6-780P-201ENST00000391030 104 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC096632.1-201ENST00000427395 310 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AL121601.2-201ENST00000438019 707 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 RPS15AP17-201ENST00000470598 390 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 MTND1P3-201ENST00000484956 952 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1FO60840 RNU6-150P-201ENST00000516237 95 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 SNORA48.10-201ENST00000516965 160 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 HMGB1P41-201ENST00000520234 440 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.07□□□□□ -1.92
CACNA1FO60840 OR5AQ1P-201ENST00000527596 927 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1FO60840 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1FO60840 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1FO60840 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1FO60840 RNA5SP295-201ENST00000362655 121 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 U8.3-201ENST00000363321 132 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 RNU6-114P-201ENST00000384704 105 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 RNU6-952P-201ENST00000391164 108 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AL138799.3-201ENST00000438968 350 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC013267.1-201ENST00000458227 267 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC092451.1-201ENST00000480211 153 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC108078.1-201ENST00000508073 725 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1FO60840 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC010486.1-201ENST00000511793 424 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC022483.1-201ENST00000514020 567 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 MTND1P35-201ENST00000526739 508 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC008127.2-201ENST00000549925 1075 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1FO60840 MIR3682-201ENST00000581338 84 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.07□□□□□ -1.92
CACNA1FO60840 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 BNIP3P9-201ENST00000603714 553 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 AC068880.5-201ENST00000624331 290 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1FO60840 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1FO60840 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CACNA1FO60840 CCT4P2-201ENST00000233836 1548 ntBASIC3.07□□□□□ -1.92
CACNA1FO60840 Y_RNA.1-201ENST00000352915 104 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CACNA1FO60840 Y_RNA.9-201ENST00000362354 101 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 RNU6-694P-201ENST00000364071 147 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 RNU6-297P-201ENST00000384636 107 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 CALM2P3-201ENST00000400429 449 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 RNU2-71P-201ENST00000411395 189 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 USP9YP13-201ENST00000417797 480 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 OFD1P18Y-201ENST00000420889 959 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 AL589872.1-201ENST00000426602 288 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 AC073464.1-201ENST00000429823 534 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.06□□□□□ -1.92
CACNA1FO60840 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.06□□□□□ -1.92
CACNA1FO60840 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.06□□□□□ -1.92
CACNA1FO60840 WASF1P1-201ENST00000447560 1131 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 HMGN2P21-201ENST00000447764 270 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 AC026410.2-201ENST00000460281 156 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.06□□□□□ -1.92
CACNA1FO60840 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.06□□□□□ -1.92
CACNA1FO60840 HSPA8P13-201ENST00000523715 472 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 HMGB1P33-201ENST00000563485 527 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 ZNF192P1-203ENST00000565888 810 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 SNORD39.3-201ENST00000584451 71 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.06□□□□□ -1.92
CACNA1FO60840 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.06□□□□□ -1.92
CACNA1FO60840 AP001521.1-201ENST00000609150 300 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 AL359880.1-201ENST00000621879 266 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.06□□□□□ -1.92
CACNA1FO60840 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.06□□□□□ -1.92
CACNA1FO60840 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CACNA1FO60840 RNU6-181P-201ENST00000363225 107 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 RNY4P34-201ENST00000364779 95 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 FGF7P8-201ENST00000402994 292 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 RPL31P2-201ENST00000413849 377 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1FO60840 AL139415.2-201ENST00000431968 163 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 AC004865.1-201ENST00000442276 1003 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1FO60840 MTND1P11-201ENST00000456661 876 ntBASIC3.05□□□□□ -1.92
CACNA1FO60840 HMGB1P28-201ENST00000507778 552 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms