Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-328P-201ENST00000390887 106 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RNU6-550P-201ENST00000391057 101 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RN7SKP111-201ENST00000410349 271 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 Y_RNA.604-201ENST00000410574 102 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RHEBP3-201ENST00000411920 351 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
ZIC3O60481 RPS12P24-201ENST00000412619 387 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RPL30P2-201ENST00000414021 291 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 OR6C66P-201ENST00000414917 930 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 CALM2P2-201ENST00000428512 440 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RPL36AP53-201ENST00000432891 316 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.14□□□□□ -1.91
ZIC3O60481 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.14□□□□□ -1.91
ZIC3O60481 CBWD4P-201ENST00000445695 655 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 CYCSP35-201ENST00000451978 304 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RNU7-180P-201ENST00000459240 63 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.14□□□□□ -1.91
ZIC3O60481 RPL38P4-201ENST00000502376 214 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.14□□□□□ -1.91
ZIC3O60481 AF235103.2-201ENST00000525753 346 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZIC3O60481 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.14□□□□□ -1.91
ZIC3O60481 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.14□□□□□ -1.91
ZIC3O60481 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.14□□□□□ -1.91
ZIC3O60481 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.14□□□□□ -1.91
ZIC3O60481 MIR4424-201ENST00000585257 86 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 AC022893.3-201ENST00000607665 437 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 AC069200.1-201ENST00000609511 323 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 MIR7975-201ENST00000619350 68 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 AC048347.1-201ENST00000624621 427 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZIC3O60481 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZIC3O60481 MTCO1P12-201ENST00000414273 1543 ntBASIC3.14□□□□□ -1.91
ZIC3O60481 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ZIC3O60481 CASC19-280ENST00000642102 1351 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.13□□□□□ -1.91
ZIC3O60481 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZIC3O60481 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC3O60481 TPTE2P4-201ENST00000258589 1605 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AF127577.6-201ENST00000623352 2191 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RNU6-1287P-201ENST00000362914 107 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RNU6-1060P-201ENST00000384664 107 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RNA5SP118-201ENST00000410385 109 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.13□□□□□ -1.91
ZIC3O60481 AC138393.2-201ENST00000414742 246 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 YPEL5P1-201ENST00000419731 367 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 UBE2D3P2-201ENST00000424409 445 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AC097713.2-201ENST00000430199 356 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 HMGB1P27-201ENST00000431429 603 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AL591212.2-201ENST00000433923 257 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 TAAR7P-201ENST00000436141 242 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 HMGB1P12-201ENST00000438594 598 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.13□□□□□ -1.91
ZIC3O60481 RPL21P104-201ENST00000464143 478 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RPS4XP13-201ENST00000483219 789 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 RPL39P36-201ENST00000490784 156 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC3O60481 AC026784.1-201ENST00000507986 352 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 TTC39CP1-201ENST00000512513 755 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 APOOP4-201ENST00000513530 597 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.13□□□□□ -1.91
ZIC3O60481 RNA5SP471-201ENST00000516971 106 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.13□□□□□ -1.91
ZIC3O60481 RANP3-201ENST00000530970 276 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 ADI1P3-201ENST00000549509 470 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC3O60481 AL110115.1-201ENST00000614396 364 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AL359547.2-201ENST00000615810 418 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 AL355365.1-201ENST00000616480 294 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
ZIC3O60481 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC3O60481 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZIC3O60481 RPS4XP5-202ENST00000449995 1334 ntBASIC3.13□□□□□ -1.91
ZIC3O60481 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
ZIC3O60481 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC3O60481 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC3O60481 UBE2L2-201ENST00000254302 429 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 NACAP2-201ENST00000318548 624 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC3O60481 RNU4-20P-201ENST00000365601 151 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC3O60481 MT-TL1-201ENST00000386347 75 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZIC3O60481 RNU4-46P-201ENST00000410818 138 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC3O60481 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.12□□□□□ -1.91
ZIC3O60481 AL159169.1-201ENST00000421119 127 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC3O60481 SRIP2-201ENST00000428470 166 ntBASIC3.12□□□□□ -1.91
ZIC3O60481 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms