Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.61□□□□□ -1.67
SRGAP3O43295 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.61□□□□□ -1.67
SRGAP3O43295 RANP3-201ENST00000530970 276 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.61□□□□□ -1.67
SRGAP3O43295 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.61□□□□□ -1.67
SRGAP3O43295 AC007566.2-201ENST00000603642 413 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.61□□□□□ -1.67
SRGAP3O43295 AC131238.1-201ENST00000617135 328 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.61□□□□□ -1.67
SRGAP3O43295 AC007792.1-201ENST00000623023 402 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 AC012442.3-202ENST00000636742 206 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRGAP3O43295 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.61□□□□□ -1.67
SRGAP3O43295 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRGAP3O43295 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRGAP3O43295 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRGAP3O43295 KPNA2P1-201ENST00000458289 1591 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 ZNF519P1-201ENST00000449011 1626 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 ZNF807-201ENST00000328088 1707 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRGAP3O43295 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRGAP3O43295 Y_RNA.5-201ENST00000362334 102 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RNA5SP322-201ENST00000363617 119 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 Y_RNA.193-201ENST00000363979 102 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RNA5SP51-201ENST00000364750 119 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 MT-TR-201ENST00000387439 65 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SRGAP3O43295 RPL21P17-201ENST00000397467 475 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 MIR450B-201ENST00000401182 78 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 MIR1302-3-201ENST00000408128 138 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SRGAP3O43295 AL035423.1-201ENST00000420331 213 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC099336.2-201ENST00000422457 254 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RPL35AP22-201ENST00000436855 335 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RPL7P28-201ENST00000437739 740 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.6□□□□□ -1.67
SRGAP3O43295 AL731563.1-201ENST00000442202 214 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.6□□□□□ -1.67
SRGAP3O43295 AL133547.1-201ENST00000448546 220 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RPS15AP27-201ENST00000449183 343 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AL162388.1-201ENST00000450912 352 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RPL12P25-201ENST00000455592 494 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC099560.2-201ENST00000457554 255 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 SNORA84-201ENST00000459229 133 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.6□□□□□ -1.67
SRGAP3O43295 BTF3L4P4-201ENST00000506381 449 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 MTCO3P44-201ENST00000510977 541 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 RNU6-764P-201ENST00000516396 105 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 MIR2114-201ENST00000516645 80 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 BNIP3P16-201ENST00000589779 534 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC073539.2-201ENST00000597113 165 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.6□□□□□ -1.67
SRGAP3O43295 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.6□□□□□ -1.67
SRGAP3O43295 AC116447.1-201ENST00000613153 453 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC007485.1-201ENST00000616755 206 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC103705.1-201ENST00000619013 241 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 AC010378.1-201ENST00000619270 362 ntBASIC4.6□□□□□ -1.67
SRGAP3O43295 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRGAP3O43295 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.6□□□□□ -1.67
SRGAP3O43295 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.6□□□□□ -1.67
SRGAP3O43295 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SRGAP3O43295 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRGAP3O43295 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRGAP3O43295 Y_RNA.364-201ENST00000365532 101 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 SNORD51-201ENST00000384320 80 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 Y_RNA.527-201ENST00000384573 102 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 RNU1-89P-201ENST00000384592 164 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AL360182.1-201ENST00000397433 468 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 RNU6-387P-201ENST00000411331 105 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.59□□□□□ -1.67
SRGAP3O43295 UBE2FP1-201ENST00000416536 447 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 NDUFB1P1-201ENST00000435191 180 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.59□□□□□ -1.67
SRGAP3O43295 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.59□□□□□ -1.67
SRGAP3O43295 RBBP4P6-201ENST00000508098 202 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 EXOC5P1-201ENST00000510543 1969 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.59□□□□□ -1.67
SRGAP3O43295 RNU1-95P-201ENST00000516357 160 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 RNU1-128P-201ENST00000516704 160 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 RN7SKP209-201ENST00000516888 304 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.59□□□□□ -1.67
SRGAP3O43295 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.59□□□□□ -1.67
SRGAP3O43295 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.59□□□□□ -1.67
SRGAP3O43295 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.59□□□□□ -1.67
SRGAP3O43295 MIR6128-201ENST00000615528 109 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 PISRT1.1-201ENST00000616930 107 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AL589994.2-201ENST00000621124 579 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AC009229.4-201ENST00000623854 1947 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AC034229.5-201ENST00000624258 185 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 AP000553.6-201ENST00000641242 118 ntBASIC4.59□□□□□ -1.67
SRGAP3O43295 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SRGAP3O43295 AC022893.2-201ENST00000564832 3296 ntBASIC4.59□□□□□ -1.68
SRGAP3O43295 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SRGAP3O43295 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SRGAP3O43295 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.58□□□□□ -1.68
SRGAP3O43295 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRGAP3O43295 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 XIAPP3-201ENST00000312918 795 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 Y_RNA.135-201ENST00000363439 95 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms