Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC092809.3-201ENST00000415453 231 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC092047.1-201ENST00000424997 240 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 ZNF863P-201ENST00000426746 417 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 MTND1P34-201ENST00000438556 671 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 RPS15AP9-201ENST00000439856 381 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC010099.1-201ENST00000455434 375 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC104472.2-201ENST00000469035 601 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 APOOP4-201ENST00000513530 597 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 Y_RNA.689-201ENST00000516589 107 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 MTCYBP20-201ENST00000524239 1129 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AP000889.1-201ENST00000530968 660 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 HMGB1P6-201ENST00000569046 646 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 EIF1P4-201ENST00000572664 335 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC024619.4-201ENST00000580924 316 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC068790.6-201ENST00000602558 258 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC008536.2-201ENST00000607284 349 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC022893.3-201ENST00000607665 437 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SMAD9O15198 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.09□□□□□ -1.91
SMAD9O15198 AC025034.2-201ENST00000623264 286 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 AC093648.1-201ENST00000623546 606 ntBASIC3.09□□□□□ -1.91
SMAD9O15198 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.09□□□□□ -1.91
SMAD9O15198 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SMAD9O15198 MTND5P29-201ENST00000458676 1807 ntBASIC3.09□□□□□ -1.92
SMAD9O15198 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SMAD9O15198 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SMAD9O15198 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SMAD9O15198 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMAD9O15198 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
SMAD9O15198 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
SMAD9O15198 MIR30E-201ENST00000362104 92 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 Y_RNA.159-201ENST00000363674 87 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 SNORA62.1-201ENST00000364287 154 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 RNU6-140P-201ENST00000384566 108 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 MIR490-201ENST00000384865 128 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 MTCO1P21-201ENST00000416634 589 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD9O15198 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD9O15198 MTCO2P19-201ENST00000427513 598 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AL592045.1-201ENST00000429867 352 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 GPM6BP2-201ENST00000432046 144 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 HMGB3P11-201ENST00000440127 604 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.08□□□□□ -1.92
SMAD9O15198 DDX3P2-201ENST00000446138 111 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 GPM6BP1-201ENST00000446387 144 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 snoU13.28-201ENST00000459235 104 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 MRPS17P3-201ENST00000465453 385 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 RPS4XP22-201ENST00000480755 780 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 RPL39P36-201ENST00000490784 156 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 RNU6-143P-201ENST00000516942 93 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 OR5AL2P-201ENST00000532185 920 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SMAD9O15198 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.08□□□□□ -1.92
SMAD9O15198 HMGB1P14-201ENST00000557424 591 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.08□□□□□ -1.92
SMAD9O15198 BNIP3P9-201ENST00000603714 553 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AL391646.1-201ENST00000603860 190 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC025449.1-201ENST00000603896 529 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC136601.2-201ENST00000604356 474 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC004832.5-201ENST00000608677 401 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC122108.2-201ENST00000611946 526 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC124864.2-201ENST00000624736 186 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.08□□□□□ -1.92
SMAD9O15198 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.08□□□□□ -1.92
SMAD9O15198 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD9O15198 U6.114-201ENST00000636407 96 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
SMAD9O15198 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD9O15198 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SMAD9O15198 API5P2-201ENST00000397055 1498 ntBASIC3.08□□□□□ -1.92
SMAD9O15198 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD9O15198 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMAD9O15198 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SMAD9O15198 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMAD9O15198 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.07□□□□□ -1.92
SMAD9O15198 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMAD9O15198 RNU6-1120P-201ENST00000362988 108 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 RNA5SP50-201ENST00000363731 107 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 RNU6-61P-201ENST00000365528 109 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 RNU6-1215P-201ENST00000384441 102 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 RNU6-1035P-201ENST00000384477 107 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 RNVU1-14-201ENST00000384770 164 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 MIR454-201ENST00000390180 115 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 RN7SKP111-201ENST00000410349 271 ntBASIC3.07□□□□□ -1.92
SMAD9O15198 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.07□□□□□ -1.92
SMAD9O15198 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.07□□□□□ -1.92
SMAD9O15198 AL109913.1-201ENST00000421173 514 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms