Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 U2.20-201ENST00000613956 192 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.9-201ENST00000615427 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.11-201ENST00000616345 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.2-201ENST00000616535 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.3-201ENST00000617785 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.19-201ENST00000618602 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RNU2-1-201ENST00000618664 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.6-201ENST00000619225 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.5-201ENST00000619465 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.10-201ENST00000620268 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 AC099063.3-201ENST00000642066 185 ntBASIC2.04□□□□□ -2.08
DFFAO00273 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 AC110491.1-201ENST00000562191 2010 ntBASIC2.03□□□□□ -2.08
DFFAO00273 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
DFFAO00273 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
DFFAO00273 AC010889.1-201ENST00000566193 2666 ntBASIC2.03□□□□□ -2.08
DFFAO00273 RNU6-223P-201ENST00000362830 107 ntBASIC2.03□□□□□ -2.08
DFFAO00273 RNU6-744P-201ENST00000365557 107 ntBASIC2.03□□□□□ -2.08
DFFAO00273 RNU6-1316P-201ENST00000384242 108 ntBASIC2.03□□□□□ -2.08
DFFAO00273 RNU6-1257P-201ENST00000384625 110 ntBASIC2.03□□□□□ -2.08
DFFAO00273 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DFFAO00273 AL953862.1-201ENST00000423016 168 ntBASIC2.03□□□□□ -2.08
DFFAO00273 SRIP2-201ENST00000428470 166 ntBASIC2.03□□□□□ -2.08
DFFAO00273 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.03□□□□□ -2.08
DFFAO00273 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.03□□□□□ -2.08
DFFAO00273 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.03□□□□□ -2.08
DFFAO00273 SNRPEP9-201ENST00000436794 238 ntBASIC2.03□□□□□ -2.08
DFFAO00273 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
DFFAO00273 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DFFAO00273 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.03□□□□□ -2.08
DFFAO00273 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
DFFAO00273 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.03□□□□□ -2.08
DFFAO00273 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.03□□□□□ -2.08
DFFAO00273 AC023141.11-201ENST00000508864 202 ntBASIC2.03□□□□□ -2.08
DFFAO00273 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.03□□□□□ -2.08
DFFAO00273 AC024589.1-201ENST00000512207 263 ntBASIC2.03□□□□□ -2.08
DFFAO00273 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.03□□□□□ -2.08
DFFAO00273 RNA5SP290-201ENST00000517133 127 ntBASIC2.03□□□□□ -2.08
DFFAO00273 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.03□□□□□ -2.08
DFFAO00273 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.03□□□□□ -2.08
DFFAO00273 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.03□□□□□ -2.08
DFFAO00273 AF038458.1-201ENST00000588406 262 ntBASIC2.03□□□□□ -2.08
DFFAO00273 AC021749.1-201ENST00000604322 607 ntBASIC2.03□□□□□ -2.08
DFFAO00273 AC007349.4-201ENST00000608114 532 ntBASIC2.03□□□□□ -2.08
DFFAO00273 AC025594.3-201ENST00000613068 790 ntBASIC2.03□□□□□ -2.08
DFFAO00273 MIR203B-201ENST00000636080 86 ntBASIC2.03□□□□□ -2.08
DFFAO00273 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DFFAO00273 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.02□□□□□ -2.09
DFFAO00273 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
DFFAO00273 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.02□□□□□ -2.09
DFFAO00273 FAM133CP-201ENST00000332869 704 ntBASIC2.02□□□□□ -2.09
DFFAO00273 SNORA38-201ENST00000363946 132 ntBASIC2.02□□□□□ -2.09
DFFAO00273 U3.40-201ENST00000408706 208 ntBASIC2.02□□□□□ -2.09
DFFAO00273 RNU6-920P-201ENST00000410926 92 ntBASIC2.02□□□□□ -2.09
DFFAO00273 NDUFS5P4-201ENST00000412983 318 ntBASIC2.02□□□□□ -2.09
DFFAO00273 UBE2FP1-201ENST00000416536 447 ntBASIC2.02□□□□□ -2.09
DFFAO00273 USP9YP11-201ENST00000427537 717 ntBASIC2.02□□□□□ -2.09
DFFAO00273 ZYG11AP1-201ENST00000430329 837 ntBASIC2.02□□□□□ -2.09
DFFAO00273 AC098831.1-201ENST00000440661 216 ntBASIC2.02□□□□□ -2.09
DFFAO00273 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
DFFAO00273 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.02□□□□□ -2.09
DFFAO00273 MEMO1P3-201ENST00000459811 302 ntBASIC2.02□□□□□ -2.09
DFFAO00273 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.02□□□□□ -2.09
DFFAO00273 AL121769.1-201ENST00000469473 401 ntBASIC2.02□□□□□ -2.09
DFFAO00273 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.02□□□□□ -2.09
DFFAO00273 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.02□□□□□ -2.09
DFFAO00273 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
DFFAO00273 AC092436.1-201ENST00000506450 503 ntBASIC2.02□□□□□ -2.09
DFFAO00273 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
DFFAO00273 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
DFFAO00273 BTF3P12-201ENST00000519620 469 ntBASIC2.02□□□□□ -2.09
DFFAO00273 AC118942.1-201ENST00000529674 1035 ntBASIC2.02□□□□□ -2.09
DFFAO00273 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
DFFAO00273 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.02□□□□□ -2.09
DFFAO00273 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.02□□□□□ -2.09
DFFAO00273 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.02□□□□□ -2.09
DFFAO00273 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.02□□□□□ -2.09
DFFAO00273 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.02□□□□□ -2.09
DFFAO00273 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.02□□□□□ -2.09
DFFAO00273 AL449363.1-201ENST00000617815 186 ntBASIC2.02□□□□□ -2.09
DFFAO00273 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
DFFAO00273 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
DFFAO00273 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
DFFAO00273 DDX43P2-201ENST00000604753 1354 ntBASIC2.01□□□□□ -2.09
DFFAO00273 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
DFFAO00273 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
DFFAO00273 RNA5SP88-201ENST00000365560 109 ntBASIC2.01□□□□□ -2.09
DFFAO00273 GSTA9P-201ENST00000406231 611 ntBASIC2.01□□□□□ -2.09
DFFAO00273 RNU2-20P-201ENST00000410425 191 ntBASIC2.01□□□□□ -2.09
DFFAO00273 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
DFFAO00273 MTCYBP38-201ENST00000417160 1123 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.01□□□□□ -2.09
DFFAO00273 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.01□□□□□ -2.09
DFFAO00273 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.01□□□□□ -2.09
DFFAO00273 SKA2P1-201ENST00000425592 390 ntBASIC2.01□□□□□ -2.09
DFFAO00273 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.01□□□□□ -2.09
DFFAO00273 MTCO3P45-201ENST00000443036 613 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.01□□□□□ -2.09
DFFAO00273 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms