Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SMKR1H3BMG3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.9□□□□□ -2.1
SMKR1H3BMG3 TEX21P-201ENST00000447107 1476 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 Y_RNA.18-201ENST00000362461 102 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 MIR301A-201ENST00000385261 86 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 U3.19-201ENST00000390893 196 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 SNORA57.1-201ENST00000391227 145 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 MIR1193-201ENST00000408109 78 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL831737.1-201ENST00000441288 271 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC096576.1-201ENST00000489014 359 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC006499.5-201ENST00000505037 514 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 MRPS33P3-201ENST00000513456 322 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 RNU6-311P-201ENST00000516224 102 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 RNU6-201P-201ENST00000517100 61 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC009902.1-201ENST00000519351 183 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 LINC00933-203ENST00000559812 219 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 CYCSP39-201ENST00000565821 309 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 MIR4443-201ENST00000585052 53 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC007938.3-201ENST00000604965 623 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AL365204.3-201ENST00000612448 685 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 uc_338.12-201ENST00000616344 181 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC009159.1-201ENST00000618386 642 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 Z99571.1-201ENST00000636677 394 ntBASIC1.9□□□□□ -2.11
SMKR1H3BMG3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.9□□□□□ -2.11
SMKR1H3BMG3 AC096644.4-201ENST00000563417 2912 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC000403.1-201ENST00000613696 3585 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 RNU6-253P-201ENST00000384730 105 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 MIR513B-201ENST00000385136 84 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 RPS20P2-201ENST00000402520 389 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AF274854.1-201ENST00000413236 615 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 USP9YP20-201ENST00000419224 558 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC097463.2-201ENST00000421074 142 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 EIF4EP4-201ENST00000424916 578 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AL353777.1-201ENST00000425552 326 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC124916.1-201ENST00000444020 547 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC072039.1-201ENST00000477611 581 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 MTND1P3-201ENST00000484956 952 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC116655.1-201ENST00000508324 901 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC008526.1-201ENST00000509149 338 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AF213884.2-201ENST00000510417 903 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC118465.1-201ENST00000513820 1271 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 RNU6-572P-201ENST00000516724 80 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 SCARNA1-201ENST00000517138 166 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 RNA5SP402-201ENST00000517148 110 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC025755.1-201ENST00000521306 278 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC123904.2-201ENST00000548059 300 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 MIR4700-201ENST00000578311 74 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AP001004.1-201ENST00000582468 324 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 MIR4999-201ENST00000585029 91 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC061975.8-201ENST00000587058 721 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC107214.2-201ENST00000608204 634 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AL391813.2-201ENST00000609113 322 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 MIR6895-201ENST00000613497 78 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AL589994.2-201ENST00000621124 579 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AP002782.1-201ENST00000623107 614 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC012640.5-201ENST00000623897 319 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 MTND5P42-201ENST00000637720 498 ntBASIC1.89□□□□□ -2.11
SMKR1H3BMG3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.89□□□□□ -2.11
SMKR1H3BMG3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms