Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AC024153.1-201ENST00000603103 365 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 MTND4LP5-201ENST00000605152 292 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AC008277.2-201ENST00000605196 797 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AP000860.1-201ENST00000605250 559 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 ATP1B3P1-201ENST00000605365 821 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AC121334.2-201ENST00000605387 271 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 BX664608.1-201ENST00000610519 487 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AC008498.1-201ENST00000613012 531 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 AP003485.2-201ENST00000623636 610 ntBASIC2.59□□□□□ -1.99
NPIPA2E9PIF3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NPIPA2E9PIF3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPIPA2E9PIF3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 RNU6-701P-201ENST00000384059 107 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL139397.2-201ENST00000404529 772 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL353777.1-201ENST00000425552 326 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 MTND1P30-201ENST00000441241 901 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AP000852.1-201ENST00000472460 573 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AP000797.1-201ENST00000478870 387 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC025281.1-201ENST00000567026 265 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC135628.1-201ENST00000568867 534 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 MIR3915-201ENST00000578518 97 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 MIR3118-1-201ENST00000581787 76 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 MIR4672-201ENST00000583126 81 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 HMGN2P15-201ENST00000585707 270 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL355877.2-201ENST00000603670 358 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AL022161.1-201ENST00000604390 213 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC007619.2-201ENST00000605743 379 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC006338.1-201ENST00000618453 749 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 Z99129.2-201ENST00000619967 314 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 AC091953.2-201ENST00000623979 160 ntBASIC2.58□□□□□ -2
NPIPA2E9PIF3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NPIPA2E9PIF3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPIPA2E9PIF3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPA2E9PIF3 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC096644.4-201ENST00000563417 2912 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RNU6-884P-201ENST00000363889 107 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RNU5E-5P-201ENST00000365379 116 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 MIR512-1-201ENST00000384913 84 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RNA5SP184-201ENST00000411071 108 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RPS15AP12-201ENST00000419498 388 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AL445567.1-201ENST00000439121 144 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 UBE2D3P4-201ENST00000441973 436 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 CECR9-201ENST00000453421 199 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 SSXP1-201ENST00000453640 473 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RPL26P9-201ENST00000457466 433 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RPL21P41-201ENST00000459863 264 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC126182.1-201ENST00000478134 357 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RPL36AP51-201ENST00000487216 318 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 RPS29P20-201ENST00000489592 171 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RPF2P2-201ENST00000504693 896 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 RNA5SP471-201ENST00000516971 106 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 RN7SKP258-201ENST00000517151 304 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AP003181.2-201ENST00000528941 181 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPA2E9PIF3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 MIR548AB-201ENST00000584917 84 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 AC091931.1-201ENST00000623488 728 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPA2E9PIF3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPA2E9PIF3 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.57□□□□□ -2
NPIPA2E9PIF3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
NPIPA2E9PIF3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms