Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNU4-62P-201ENST00000410125 130 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 RNU6-733P-201ENST00000410759 104 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 TATDN1P1-201ENST00000414123 891 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 RPL7P29-201ENST00000437151 728 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 AL513124.1-201ENST00000450410 614 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 KATNBL1P4-201ENST00000503545 918 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 AC079140.2-201ENST00000506193 142 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 AF213884.2-201ENST00000510417 903 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 SNORA70.16-201ENST00000516390 95 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 SULT1C2P1-202ENST00000562418 459 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
LINC01549A6NIU2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
LINC01549A6NIU2 RNU6-1249P-201ENST00000363237 111 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 SNORA29-201ENST00000384183 140 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 Y_RNA.493-201ENST00000384422 102 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 NDUFS5P1-201ENST00000405668 289 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 UBE2V2P4-201ENST00000447495 259 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC117454.1-201ENST00000491120 168 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC091917.2-201ENST00000505002 744 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01549A6NIU2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AP003034.1-201ENST00000534621 422 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC090115.3-201ENST00000553218 849 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC021171.1-201ENST00000603137 706 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AL713998.2-201ENST00000604538 1198 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC008121.3-201ENST00000618726 433 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AC083865.1-201ENST00000636634 831 ntBASIC0.43□□□□□ -2.34
LINC01549A6NIU2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.43□□□□□ -2.34
LINC01549A6NIU2 RNU1-22P-201ENST00000363334 158 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 RNU6-374P-201ENST00000364146 108 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 RNU6-516P-201ENST00000411381 104 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AP1B1P2-201ENST00000416196 106 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC083875.1-201ENST00000419509 405 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 OFD1P18Y-201ENST00000420889 959 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 BX276092.3-201ENST00000424182 230 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 CST2P1-201ENST00000425770 87 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC006548.1-201ENST00000427470 102 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC092573.2-201ENST00000434546 243 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 MED6P1-201ENST00000439659 713 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AL161651.1-201ENST00000440882 223 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 snoU13.26-201ENST00000459452 105 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 CENPUP1-201ENST00000526649 1202 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AP003122.4-201ENST00000530980 758 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC233702.2-202ENST00000562547 291 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01549A6NIU2 MTCYBP22-201ENST00000603788 447 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC098826.3-201ENST00000603823 466 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC087045.1-201ENST00000605856 382 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 MIR6835-201ENST00000621552 64 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 AC073308.1-201ENST00000623696 305 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 CR381572.1-201ENST00000625098 102 ntBASIC0.42□□□□□ -2.34
LINC01549A6NIU2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 RNU6-1083P-201ENST00000384022 107 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 MT-TC-201ENST00000387405 66 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 RNU6-1197P-201ENST00000391183 107 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 SNORA11.2-201ENST00000408318 127 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 CYCSP33-201ENST00000414485 327 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 MRPL35P4-201ENST00000453682 566 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 PSMC1P5-201ENST00000512850 177 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 RNU6-113P-201ENST00000516653 101 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AP003484.1-201ENST00000530974 250 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 EIF5A2P1-201ENST00000564027 460 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01549A6NIU2 VN1R107P-201ENST00000601784 209 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC008121.1-201ENST00000603244 268 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC073111.2-201ENST00000605657 1075 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AL365204.3-201ENST00000612448 685 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC022202.1-201ENST00000613515 211 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 AC068057.2-201ENST00000624047 895 ntBASIC0.41□□□□□ -2.34
LINC01549A6NIU2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 RNU6-1074P-201ENST00000383995 104 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 MIR222-201ENST00000384992 110 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 MIR218-1-201ENST00000384999 110 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms