Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU2-41P-201ENST00000410991 178 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 RPL7P10-201ENST00000417407 739 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC007560.1-201ENST00000426912 237 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 MTND4LP16-201ENST00000440828 295 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 MRPL50P4-201ENST00000446432 475 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AL500522.2-201ENST00000448562 343 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 MTND1P11-201ENST00000456661 876 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-329P-201ENST00000459618 107 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC103851.1-201ENST00000506833 274 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 SNORA14.1-201ENST00000516113 141 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 RNA5SP179-201ENST00000517284 121 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC090136.1-201ENST00000520009 240 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 CYCSP30-201ENST00000546447 172 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 YPEL5P3-201ENST00000547227 352 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC026464.5-201ENST00000562497 722 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 FGF7P1-201ENST00000582820 288 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC243960.4-201ENST00000600532 288 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AC002044.1-201ENST00000606707 158 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 AL031601.2-202ENST00000622650 282 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3L4A6NDZ8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 MIR412-201ENST00000362142 91 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-797P-201ENST00000363101 109 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RNA5SP399-201ENST00000364003 117 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.263-201ENST00000364659 114 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.356-201ENST00000365475 113 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.480-201ENST00000384364 102 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 SNORA1.3-201ENST00000384676 136 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AL356432.1-201ENST00000405809 419 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 MIR1251-201ENST00000408552 70 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 YME1L1P1-201ENST00000429435 297 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC005019.1-201ENST00000436455 431 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 ANP32BP2-201ENST00000454525 545 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RPS26P28-201ENST00000470806 348 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC006517.1-201ENST00000480485 328 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RPL30P14-201ENST00000482744 348 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-572P-201ENST00000516724 80 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-928P-201ENST00000516876 104 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 SNORA31.19-201ENST00000517079 126 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC009902.1-201ENST00000519351 183 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC090281.1-201ENST00000523019 276 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC011602.1-201ENST00000546484 331 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC104662.1-201ENST00000604448 511 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC021646.1-201ENST00000605469 484 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC069200.1-201ENST00000609511 323 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 MIR6076-201ENST00000617521 113 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 RMST_7.1-201ENST00000621935 268 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 AC073308.1-201ENST00000623696 305 ntBASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
MBD3L4A6NDZ8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.53□□□□□ -1.85
MBD3L4A6NDZ8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC011266.1-201ENST00000624119 3569 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RNU1-108P-201ENST00000362556 161 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RNU6-1035P-201ENST00000384477 107 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AL353621.1-201ENST00000418219 243 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 MTND3P23-201ENST00000431980 347 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 SNRPEP4-201ENST00000435815 279 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AL590664.1-201ENST00000448065 339 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 SSXP4-201ENST00000451349 245 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AL583843.1-201ENST00000456070 346 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC087884.1-201ENST00000469738 328 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RN7SL585P-201ENST00000470538 280 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC117503.1-201ENST00000472241 394 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms