Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL133383.2-201ENST00000622958 2336 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 TPTE2P4-201ENST00000258589 1605 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-190P-201ENST00000384154 102 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC091390.3-201ENST00000426478 338 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 HMGB1P27-201ENST00000431429 603 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 MTND4P25-201ENST00000441039 533 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 CBWD4P-201ENST00000445695 655 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 MTND3P10-201ENST00000450967 341 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 ELOCP23-201ENST00000452014 332 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 EIF4EP3-201ENST00000498782 656 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC091885.1-201ENST00000506658 268 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 RBBP4P6-201ENST00000508098 202 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 RANP3-201ENST00000530970 276 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 ADI1P3-201ENST00000549509 470 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 ASNSP3-201ENST00000451989 1306 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-1287P-201ENST00000362914 107 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 Y_RNA.157-201ENST00000363638 102 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 DEFB109C-201ENST00000382575 264 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 DEFB109B-201ENST00000382656 264 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-1060P-201ENST00000384664 107 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 MIR514A2-201ENST00000385131 88 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 MIR514A3-201ENST00000385132 88 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-550P-201ENST00000391057 101 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RN7SKP111-201ENST00000410349 271 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RPS12P24-201ENST00000412619 387 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 OR6C66P-201ENST00000414917 930 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RPL21P23-201ENST00000446654 460 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RPL39P36-201ENST00000490784 156 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU4-29P-201ENST00000515943 174 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-123P-201ENST00000516163 102 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-1256P-201ENST00000516539 103 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 Y_RNA.689-201ENST00000516589 107 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 RNA5SP309-201ENST00000516670 106 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 ATP5F1P5-201ENST00000526403 760 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 OR5B10P-201ENST00000532869 642 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AL121579.1-201ENST00000555129 305 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AC010525.2-201ENST00000590920 195 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AC002545.1-201ENST00000592511 181 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AC013553.2-201ENST00000604244 589 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 AC012442.3-202ENST00000636742 206 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 OR4G1P-203ENST00000641984 1631 ntBASIC3.37□□□□□ -1.87
TCRBV7S3A2A0A539 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-38P-201ENST00000384085 107 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 UBE2V1P2-201ENST00000397758 440 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 BX323014.1-201ENST00000412876 237 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC092809.3-201ENST00000415453 231 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 RPS15AP6-201ENST00000420703 385 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 TAAR7P-201ENST00000436141 242 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 HSPD1P21-201ENST00000436541 245 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 HMGB1P12-201ENST00000438594 598 ntBASIC3.36□□□□□ -1.87
TCRBV7S3A2A0A539 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms