Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 ZNF29P-201ENST00000225587 168 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 Y_RNA.111-201ENST00000363248 100 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 SNORA7.1-201ENST00000363750 139 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 RNA5SP212-201ENST00000391223 107 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 BTF3L4P2-201ENST00000392798 346 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 HMGB1P17-201ENST00000403495 628 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 RPL21P90-201ENST00000415692 466 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 BX276092.3-201ENST00000424182 230 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 RPS15AP5-201ENST00000436276 388 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 PIGFP3-201ENST00000441918 722 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC107953.1-201ENST00000522216 297 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AP002748.2-201ENST00000528671 348 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR3126-201ENST00000577443 74 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AF131215.7-201ENST00000602443 707 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 BNIP3P4-201ENST00000604946 565 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC080013.4-201ENST00000607624 649 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC007349.4-201ENST00000608114 532 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC022202.1-201ENST00000613515 211 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 STMN1P1-201ENST00000617809 440 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC024581.2-201ENST00000619986 252 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 AC087821.2-201ENST00000637086 450 ntBASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU4-38P-201ENST00000364472 129 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU6-76P-201ENST00000384060 104 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 U8.10-201ENST00000384260 133 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 ATP5F1P6-201ENST00000402768 767 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AL356421.1-201ENST00000403255 413 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 NDUFS5P1-201ENST00000405668 289 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR1289-2-201ENST00000408360 111 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 RPL23AP36-201ENST00000413895 458 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AC096649.2-201ENST00000416186 393 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 RPL30P13-201ENST00000418873 348 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AP1S2P1-201ENST00000457344 379 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AC092757.1-201ENST00000467293 467 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AC114801.2-201ENST00000503825 781 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AP000873.5-201ENST00000533906 236 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AC105245.1-201ENST00000581934 244 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR4713-201ENST00000582691 75 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR6130-201ENST00000619419 109 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AL353770.2-201ENST00000620024 78 ntBASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV1-2A0A0B4J238 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 CBX3P1-201ENST00000325243 554 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU6-457P-201ENST00000363999 107 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU6-939P-201ENST00000384634 107 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC007742.1-201ENST00000425789 329 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 ELOCP26-201ENST00000436067 329 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC009474.2-201ENST00000451383 136 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC113420.1-201ENST00000507903 571 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC117532.1-201ENST00000514638 323 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 LSM6P2-201ENST00000552208 177 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC016925.2-201ENST00000605108 242 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AL121652.1-201ENST00000608851 448 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AC024595.1-201ENST00000623088 387 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 AP003476.1-201ENST00000623984 516 ntBASIC0.84□□□□□ -2.27
TRAV1-2A0A0B4J238 OR4G11P-202ENST00000642116 1414 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 MIR26B-201ENST00000362251 77 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms