Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 XIAPP3-201ENST00000312918 795 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 UBE2V1P2-201ENST00000397758 440 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AL109755.1-201ENST00000401791 649 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 RNU2-36P-201ENST00000410361 191 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 Y_RNA.605-201ENST00000410577 105 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC079780.1-201ENST00000428259 207 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC087650.1-201ENST00000431445 468 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC016696.1-201ENST00000446949 318 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 HMGB3P22-202ENST00000451823 572 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 RN7SL132P-201ENST00000478131 296 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC025445.1-201ENST00000502728 300 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 CCDC34P1-201ENST00000507441 517 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC098591.2-201ENST00000510152 315 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 PTP4A1P4-201ENST00000512479 322 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 RNA5SP454-201ENST00000517231 127 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AL137161.1-201ENST00000532231 390 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 CYCSP30-201ENST00000546447 172 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC092747.3-201ENST00000603769 301 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 Z82243.1-201ENST00000609432 473 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC133104.2-201ENST00000615272 193 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 RMST_9.1-201ENST00000619945 193 ntBASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HS3ST4Q9Y661 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC068254.2-201ENST00000623938 3577 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 BDP1P-201ENST00000582658 1990 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 MIR448-201ENST00000362131 111 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 Y_RNA.167-201ENST00000363735 109 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 SNORD115-7-201ENST00000365306 82 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 SNORA3.3-201ENST00000408712 125 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AL160275.2-201ENST00000412010 394 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 RPL36AP6-201ENST00000435770 321 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC090774.1-201ENST00000435925 246 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 FABP5P14-201ENST00000437273 393 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AL353748.1-201ENST00000440753 474 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AL137792.2-201ENST00000443484 235 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC020550.1-201ENST00000447385 163 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 RPS27P27-201ENST00000498779 255 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC146944.2-203ENST00000502493 354 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 VN1R104P-201ENST00000505115 1009 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 MTCYBP40-201ENST00000509390 1135 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC139495.1-202ENST00000513164 354 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 RNU6-256P-201ENST00000516747 97 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 RNU6-64P-201ENST00000517119 105 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 IMMP1LP2-201ENST00000552954 492 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC087499.8-201ENST00000578406 226 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AC012443.1-201ENST00000605605 231 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 AP001486.3-201ENST00000615334 372 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 MTND4P1-201ENST00000457501 1466 ntBASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.97□□□□□ -1.77
HS3ST4Q9Y661 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HS3ST4Q9Y661 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
HS3ST4Q9Y661 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.77
HS3ST4Q9Y661 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.77
HS3ST4Q9Y661 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HS3ST4Q9Y661 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.96□□□□□ -1.78
HS3ST4Q9Y661 RNU6-1188P-201ENST00000363795 107 ntBASIC3.96□□□□□ -1.78
HS3ST4Q9Y661 RNU6-82P-201ENST00000363970 107 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms