Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 OR4G11P-202ENST00000642116 1414 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 U3.40-201ENST00000408706 208 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 RNU6-1328P-201ENST00000410938 106 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 MTND1P23-201ENST00000416931 372 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 HMGN2P19-201ENST00000425149 265 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 USP9YP34-201ENST00000453983 808 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 BOLA3P3-201ENST00000505182 232 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 RNU2-19P-201ENST00000517288 84 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 AC098848.2-201ENST00000588023 330 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 AC080013.4-201ENST00000607624 649 ntBASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SCN10AQ9Y5Y9 RNU6-741P-201ENST00000383889 107 ntBASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AC087465.1-201ENST00000560574 245 ntBASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AC022662.1-201ENST00000580252 331 ntBASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 WISP1-OT1-201ENST00000602893 642 ntBASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 SEPT7P9-203ENST00000604116 343 ntBASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 AC012493.3-201ENST00000604494 112 ntBASIC1.65□□□□□ -2.14
SCN10AQ9Y5Y9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 RNU6-1005P-201ENST00000384519 107 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 MIR16-1-201ENST00000385271 89 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 USP9YP6-201ENST00000413550 854 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 MTATP6P7-201ENST00000453315 681 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 AF131216.2-201ENST00000512316 564 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 NDUFS5P6-201ENST00000529136 295 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 FTX_3.1-201ENST00000610451 147 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 AC090772.4-201ENST00000623599 362 ntBASIC1.65□□□□□ -2.15
SCN10AQ9Y5Y9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 ZNF209P-201ENST00000593450 2304 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 HMGN2P38-201ENST00000423806 265 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AL354695.1-201ENST00000427935 228 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AL049734.2-201ENST00000441066 616 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 MTND2P6-201ENST00000455337 1030 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AC084024.2-201ENST00000503480 791 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 MIR514B-201ENST00000516774 80 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 MIR4529-201ENST00000578110 78 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 AC135507.1-201ENST00000607214 561 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 OR10AB1P-201ENST00000609613 938 ntBASIC1.64□□□□□ -2.15
SCN10AQ9Y5Y9 SUMO2P12-201ENST00000405924 140 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 FCF1P2-201ENST00000415284 583 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 XKRYP1-201ENST00000423438 492 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 XKRYP2-201ENST00000432915 492 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 MTCO1P48-201ENST00000448024 1096 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC138853.1-201ENST00000503549 823 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC103833.1-201ENST00000517442 172 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC010186.2-204ENST00000537668 439 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC008127.2-201ENST00000549925 1075 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC090888.1-201ENST00000561335 1141 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC007151.1-201ENST00000572774 483 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AL161423.1-201ENST00000613700 262 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 MIR6779-201ENST00000617283 64 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC073308.1-201ENST00000623696 305 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 U6.101-201ENST00000637707 76 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 RNA5SP125-201ENST00000364843 120 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 RNU6-1083P-201ENST00000384022 107 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 SNORA67.6-201ENST00000391093 99 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC023141.4-201ENST00000412031 328 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 FAM204CP-201ENST00000424489 642 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 NIFKP8-201ENST00000560500 874 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AL022067.1-201ENST00000602426 454 ntBASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN10AQ9Y5Y9 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 267.6 ms