Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-1148P-201ENST00000410992 104 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 RNA5SP111-201ENST00000411386 101 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 BX323014.1-201ENST00000412876 237 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 RPL17P36-201ENST00000420302 549 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AL160275.3-201ENST00000423876 471 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AL162151.2-201ENST00000448875 158 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AL590639.1-201ENST00000456484 337 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 FAM206BP-201ENST00000510179 541 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-1256P-201ENST00000516539 103 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-914P-201ENST00000516749 109 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 RNA5SP468-201ENST00000516782 93 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC087241.2-201ENST00000535801 324 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC243972.3-201ENST00000539655 198 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 OR11H5P-201ENST00000554039 926 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 MIR5583-1-201ENST00000580941 59 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC244505.7-201ENST00000599675 272 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AL117336.2-201ENST00000602435 335 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 MIR15A-201ENST00000607334 83 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC107294.1-201ENST00000609524 467 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC009248.2-201ENST00000619826 254 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AC121333.1-201ENST00000567488 2709 ntBASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHA3Q9Y5H8 AL353746.1-201ENST00000566293 6881 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-1167P-201ENST00000363227 94 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 Y_RNA.142-201ENST00000363491 102 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 Y_RNA.167-201ENST00000363735 109 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 Y_RNA.378-201ENST00000365652 113 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 Y_RNA.399-201ENST00000383955 105 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 MT-TD-201ENST00000387419 68 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 SNORA57.1-201ENST00000391227 145 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 BX842559.1-201ENST00000419615 532 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AL590383.1-201ENST00000428602 75 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 IFNA20P-201ENST00000436840 528 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC008264.1-201ENST00000447612 367 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RPS15AP27-201ENST00000449183 343 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RPL31P60-201ENST00000478450 367 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC104136.1-201ENST00000512969 394 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RN7SKP256-201ENST00000517201 314 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RANP9-201ENST00000519957 271 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC107953.1-201ENST00000522216 297 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RAB11AP2-201ENST00000545905 639 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 MTCO3P23-201ENST00000561363 289 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 VN1R80P-201ENST00000597126 338 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 C8orf59P2-201ENST00000603441 271 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC092807.2-201ENST00000609367 243 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AC093913.1-201ENST00000614178 329 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 AL732372.2-225ENST00000642124 456 ntBASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHA3Q9Y5H8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 HSPA8P4-201ENST00000511877 1920 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-50P-201ENST00000362356 103 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RNU1-13P-201ENST00000384499 162 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 Y_RNA.530-201ENST00000384587 101 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-628P-201ENST00000410675 107 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 PDCL2P1-201ENST00000419302 352 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms