Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC118273.1-201ENST00000525324 3006 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AP004289.2-201ENST00000444413 1457 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 MAPK10-372ENST00000641954 3413 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 MT-TD-201ENST00000387419 68 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 RNA5SP171-201ENST00000391071 115 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 EIF4E2P1-201ENST00000393781 255 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 PTMAP2-201ENST00000397627 327 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 FAT1P1-201ENST00000406588 507 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 RAP1BP3-201ENST00000407180 549 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 U3.42-201ENST00000408746 214 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.615-201ENST00000410769 117 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 USP9YP20-201ENST00000419224 558 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 HMGB3P11-201ENST00000440127 604 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC093019.1-201ENST00000443135 252 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AL590639.1-201ENST00000456484 337 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC034236.1-201ENST00000469891 373 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SL585P-201ENST00000470538 280 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 TTC39CP1-201ENST00000512513 755 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-875P-201ENST00000516488 106 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU1-45P-201ENST00000517191 141 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC243972.3-201ENST00000539655 198 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AL592436.1-201ENST00000605135 558 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC103705.1-201ENST00000619013 241 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR6075-201ENST00000620782 95 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC019278.1-201ENST00000623516 479 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC022418.1-201ENST00000624118 445 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AC090617.10-201ENST00000624308 134 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.97□□□□□ -1.77
PCDHGA3Q9Y5H0 AF117829.1-206ENST00000621883 3802 ntBASIC3.96□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-371P-201ENST00000364283 108 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU6-522P-201ENST00000364497 107 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORA4.3-201ENST00000365564 137 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU6-45P-201ENST00000384471 107 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU1-89P-201ENST00000384592 164 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORA1.3-201ENST00000384676 136 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AL139039.1-201ENST00000401900 692 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR1911-201ENST00000410783 80 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU2-41P-201ENST00000410991 178 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 RBMY1KP-201ENST00000423480 476 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 SNRPEP4-201ENST00000435815 279 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 IFNA20P-201ENST00000436840 528 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 HMGB1P30-201ENST00000492455 606 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 FAM206BP-201ENST00000510179 541 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC114781.4-201ENST00000513707 639 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AL157871.3-201ENST00000557231 293 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC005261.5-201ENST00000596280 355 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC092747.3-201ENST00000603769 301 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 AC009248.2-201ENST00000619826 254 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 MTND4P35-201ENST00000604257 1375 ntBASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA3Q9Y5H0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 ZNF285B-201ENST00000561698 1767 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms